Factsheet for PGSC0003DMT400063408

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g115710.1.1	Tomato	plasma membrane	97.48	86.66
VIT_17s0000g06620.t01	Wine grape	plasma membrane	48.61	70.52
PGSC0003DMT400043793	Potato	cytosol, plastid	26.69	62.23
CDX87209	Canola	plasma membrane	60.69	54.53
Bra035934.1-P	Field mustard	plasma membrane	60.42	54.43
AT5G61350.1	Thale cress	plasma membrane	60.29	53.92
PGSC0003DMT400035099	Potato	cytosol	26.96	53.56
PGSC0003DMT400043784	Potato	cytosol	25.23	52.63
GSMUA_Achr4P32700_001	Banana	plasma membrane	47.54	51.51
Zm00001d034089_P001	Maize	plasma membrane	56.31	50.42
KXG37500	Sorghum	plasma membrane	56.18	50.06
TraesCS5D01G406800.1	Wheat	plasma membrane	56.18	50.0
TraesCS5B01G402100.1	Wheat	plasma membrane	56.31	50.0
TraesCS5A01G397100.1	Wheat	plasma membrane	56.18	50.0
HORVU5Hr1G096860.2	Barley	mitochondrion	56.57	49.59
KRH03519	Soybean	plasma membrane	56.04	49.01
PGSC0003DMT400064427	Potato	plasma membrane	53.52	48.32
Os03t0759600-00	Rice	plasma membrane, plastid	57.1	48.21
PGSC0003DMT400049559	Potato	plasma membrane	52.99	47.78
PGSC0003DMT400090495	Potato	plasma membrane	52.99	47.78
GSMUA_Achr11P...	Banana	plasma membrane	47.54	47.23
PGSC0003DMT400094265	Potato	plasma membrane	54.45	46.96
PGSC0003DMT400008766	Potato	plasma membrane	53.25	45.99
PGSC0003DMT400060204	Potato	plasma membrane	50.2	44.89
PGSC0003DMT400040185	Potato	plasma membrane	49.54	44.72
PGSC0003DMT400025093	Potato	plasma membrane	48.74	44.27
PGSC0003DMT400067688	Potato	plasma membrane	46.35	42.66
PGSC0003DMT400060442	Potato	plasma membrane	43.43	39.98
PGSC0003DMT400054599	Potato	plasma membrane	44.49	38.59
PGSC0003DMT400076840	Potato	plasma membrane	45.15	38.25
PGSC0003DMT400056220	Potato	plasma membrane	43.29	38.17
PGSC0003DMT400018850	Potato	plasma membrane	43.43	36.78
PGSC0003DMT400038535	Potato	plasma membrane	39.71	36.55
PGSC0003DMT400003461	Potato	plasma membrane	42.1	36.31
PGSC0003DMT400003464	Potato	plasma membrane	40.77	35.86
PGSC0003DMT400018829	Potato	plasma membrane	43.69	33.0
PGSC0003DMT400091500	Potato	plasma membrane	35.33	23.44
PGSC0003DMT400027429	Potato	plasma membrane	35.46	22.47

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009705	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0019725
GO:GO:0030154	GO:GO:0051924	GO:GO:0080147	GO:GO:0097275	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1CAM6	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	EnsemblPlantsGene:PGSC0003DMG400024665	PGSC:PGSC0003DMG400024665
EnsemblPlants:PGSC0003DMT400063408	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF106
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS
TMHMM:TMhelix	UniParc:UPI00029665D8	SEG:seg	:	:	:

Description

Kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400024665]

Coordinates

chr3:-:55546289..55548550

Molecular Weight (calculated)

83343.7 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.122

Length

753 amino acids

Sequence
(BLAST)

001: MYRFLVFKPG RHWVRLYFYP IQHPNYNLAS AMFTVTSDNI VLLHDFSVKD TSKVVFKEYL INITSSQFTL KFSPLKRSFA FINAIEFVSA PDDLIPDSAA
101: AVSPVGDFNG LSQFAFEVSY RLNVGGPIVT PKNDTLWRTW LPDNKYMAFP EGAQNVSVPL TTIVYPDGGA TPLIAPSSVY ATADMMADSG VPNSNFKLTW
201: EMDVDSSFSY FIRMHFCDIV SKGLNELYFN VYVNEVVGVS SLDLSTLTSE LATPYYKDFV LNATAITNGS IIVQVGPASN VQSILPNAIL NGLEVMKMSN
301: MEGSLDGLFS SGGRHGVMPR SRGMRIAAAF GLAMGVTALV LLLMGIVRWR RKPTKGWEKQ KTFSSWLPLN ASYCSFMSSK SKTSCSTIIS SGLNFGRVFT
401: FNEIKKTTKN FDEKAVIGVG GFGKVYLGVS EDGTKLAIKR GNPSSSQGIN EFLTEIELLS KLRHRHLVSL IGYCDEQSEM ILVYEYMSNG PLRDHIYGST
501: LPTLTWKQRL EICIGAARGL HYLHTGSTQG IIHRDIKTTN ILLDEDFVAK MADFGLSKTG PSLEQTHVST AVKGSFGYLD PEYFRRQQLT EKSDVYSFGV
601: VLFEVLCARP ALDPALPREQ VNLAEWAMQQ HRKGTLEKII DPHIAGTISP EALRKYVEAA EKCLAEYGVD RPAMGDVLWN LEYALQLESA SPSSVPVKNE
701: NEKENENENS KPSSSEQPGT NSKSNKEAQL IDINDDSGVV VGSPMFLEGF QGR

Best Arabidopsis Sequence Match ( AT5G61350.1 )
(BLAST)

001: MGGDFRHFSS HVSLLLLFLL IVKSSSSFTP ADNYLIDCGS SDETKLSDGR NFKSDQQSVA FLQTDEDIKT SVDSIPITDS NASTLPLYLT ARIFAGKSTY
101: SFYISRPGRH WIRLHFYPLN HPLYNLTNSV FSVTTDTTVL LHDFSAGDTS SIVFKEYLIY AAEKLSLYFK PHKGSTAFIN AVEIVSVPDE LVPDSASSVP
201: QAPDFKGLSS FSLEILHRIN IGGDLISPKI DPLSRTWLSD KPYNTFPEGS RNVTVDPSTI TYPDGGATAL IAPNPVYATA EEMADAQTSQ PNFNLSWRMS
301: VDFGHDYFIR LHFCDIVSKS LNDLIFNVFI NKLSAISALD LSSLTSALGT AYYADFVLNA STITNGSILV QVGPTPNLQS GKPNAILNGL EIMKLNNAAG
401: SLDGLFGVDG KYKGPIGGMS SKKLAIAGIG FVMALTAFLG VVVLLVRWQR RPKDWQKQNS FSSWLLPLHA SHSSYISSKG GSTSRRMSIF GSKKSKSNGF
501: SSFFSNQGLG RYFPFTELQT ATQNFDENAV CGVGGFGKVY IGEIDGGTQV AIKRGSQSSE QGINEFQTEI QMLSKLRHRH LVSLIGFCDE NKEMILVYEY
601: MSNGPLRDHL YGSKENDPNP IPTLSWKQRL EICIGSARGL HYLHTGAAQG IIHRDVKTTN ILLDENLVAK VSDFGLSKDA PMDEGHVSTA VKGSFGYLDP
701: EYFRRQQLTD KSDVYSFGVV LFEVLCARPV INPQLPREQV NLAEYAMNLH RKGMLEKIID PKIVGTISKG SLRKFVEAAE KCLAEYGVDR PGMGDVLWNL
801: EYALQLQEAS AQVDLSEDKT TMNIEMDLIP GEEMQSPSHS IP

Arabidopsis Description

Probable receptor-like protein kinase At5g61350 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLJ8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.