Factsheet for Solyc01g109950.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
nucleus 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400094265	Potato	plasma membrane	97.59	97.59
Solyc10g054050.1.1	Tomato	plasma membrane	67.93	74.59
VIT_03s0038g04340.t01	Wine grape	plasma membrane	62.43	64.42
Solyc07g063480.2.1	Tomato	cytosol, nucleus, plasma membrane	22.22	63.82
Bra010704.1-P	Field mustard	plasma membrane	59.45	60.56
CDX90312	Canola	plasma membrane	59.45	60.56
KRH20802	Soybean	plasma membrane	60.25	60.53
CDY12121	Canola	plasma membrane	58.88	59.98
KRH27450	Soybean	plasma membrane	60.14	59.8
CDY41962	Canola	plasma membrane	58.53	59.49
Solyc06g005230.1.1	Tomato	plastid	25.43	59.36
Bra011875.1-P	Field mustard	plasma membrane	58.53	59.28
CDY56768	Canola	plasma membrane	57.85	59.06
Bra030296.1-P	Field mustard	plasma membrane	56.82	58.91
AT4G39110.1	Thale cress	plasma membrane	59.11	58.77
Bra033598.1-P	Field mustard	plasma membrane	57.16	58.57
AT2G21480.1	Thale cress	plasma membrane	58.3	58.44
CDX72717	Canola	plasma membrane	57.04	58.25
CDY15889	Canola	plasma membrane	56.93	58.13
CDX99588	Canola	plasma membrane	56.82	57.94
CDY42608	Canola	plasma membrane	45.13	57.94
Os06t0126250-01	Rice	plasma membrane	54.98	56.8
Solyc05g013300.1.1	Tomato	cytosol	20.73	56.04
GSMUA_Achr7P20760_001	Banana	plasma membrane	44.33	55.84
Zm00001d045515_P001	Maize	plasma membrane	52.35	53.7
HORVU7Hr1G010130.1	Barley	plasma membrane	51.78	53.55
TraesCS7D01G050100.1	Wheat	plasma membrane	51.66	53.44
EER89103	Sorghum	plasma membrane	52.58	53.19
GSMUA_Achr4P09870_001	Banana	plasma membrane	40.21	53.18
TraesCS7A01G055000.1	Wheat	plasma membrane	51.32	53.02
TraesCS4A01G441600.1	Wheat	plasma membrane	51.2	52.96
Solyc03g115710.1.1	Tomato	plasma membrane	50.86	52.42
Solyc03g059070.2.1	Tomato	plasma membrane	28.29	51.67
GSMUA_AchrUn_...	Banana	plasma membrane, vacuole	41.47	50.99
Solyc10g006870.1.1	Tomato	plasma membrane	45.59	47.38
Zm00001d035992_P001	Maize	plasma membrane	51.32	45.03
Solyc09g015830.1.1	Tomato	plastid	33.45	44.99
Solyc11g072910.1.1	Tomato	plasma membrane	42.96	44.96
Solyc05g054680.1.1	Tomato	plasma membrane	42.5	44.06
Solyc01g059910.2.1	Tomato	plastid	36.31	41.06
Solyc05g054860.1.1	Tomato	plasma membrane	38.03	40.94
Solyc06g009550.2.1	Tomato	plasma membrane	33.79	40.63
Solyc06g009540.1.1	Tomato	plasma membrane	39.75	39.12
Solyc07g008400.1.1	Tomato	plasma membrane	38.26	39.11
Solyc03g044160.1.1	Tomato	plasma membrane	35.17	37.58
Solyc02g089090.2.1	Tomato	plasma membrane	36.43	36.59
Solyc02g069970.2.1	Tomato	plasma membrane	26.92	35.18
Solyc02g014030.1.1	Tomato	plasma membrane	32.42	24.57

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K4B3K8
InterPro:Kinase-like_dom_sf	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF243	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc01g109950.2	EnsemblPlants:Solyc01g109950.2.1
TMHMM:TMhelix	UniParc:UPI0002768BB4	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:96773764..96776718

Molecular Weight (calculated)

95890.7 Da

IEP (calculated)

5.825

GRAVY (calculated)

-0.206

Length

873 amino acids

Sequence
(BLAST)

001: MSGGSPSPPS STIMANILVA FVCLIFIGPS SVIPVSAQSD STAPAKSFPA STPSDNYLIN CGSTSPTTLP GNRAFQPDET TAKYLAYSGR DLHISAPDNK
101: NVPSPMYLSA KIFDSEATYT FHVTSPGLHW IRLYFYPLQN NEFNLQTAKF SVSVDKLVLL RDYQMEKNEP VMKEFLVNVT TERYAIKFAP SKGSIAFVNA
201: MEFVTAPGKL LDYSVPLLFP VSQKFDLSTS NFETTYRLNV GGAYLDATND TLGRSWLSDE PFRNSATGQA VTVQPSVIQY PTAGGSPLIA PPTVYSSAVK
301: MADSETTIPN FNISWTMDID TAYTYLIRLH FCDIISKSLN ELYFNVYIND KMAISGLDLS SLTQRLATAF YKDFVIDASS ATNPLSVKVS PVNDVQGFKN
401: AILNGLEVFR MNNSMGSLDG QYGVDGTKSS GPSKTVAYVG FAMMFGAFVG LGAIVFKWQK RPQDWQKRNS FSSWLLPLHA GDTSFMAGSK ASLSRKSQFF
501: SSNMGLGRYF SFAELSDATN NWESTAIIGV GGFGNVYYGE IDDGTKVAVK RGNPQSEQGI NEFQTEIQML SKLRHRHLVS LIGYCDENAE MILVYEFMQN
601: GPFRDHLYGK NFPPLTWKQR LEICIGSARG LHYLHTGAST AIIHRDVKTT NILLDENLVA KMADFGLSKD CLANETHVST AVKGSFGYLD PEYFRKQQLT
701: DKSDVYSFGV VLLEALCARP AINPALPREQ VNLAEWGMQW KKKGLLDKII DPTLVGQINP ESMKKFGEAA EKCLSEYGAD RPTMGDVLWN LEYALQLQEA
801: SLQGKTEEEN KASPSPVSPA IVAPTPAPVP APSTPDNRPV STPEQTTNPA ELQTIDDHSG TKMFDQFGAL NGR

Best Arabidopsis Sequence Match ( AT4G39110.1 )
(BLAST)

001: MEIRKKPNIF TVLVIDFSSK PSMALLLAIL LFLSGPSASA VAAAAVGPAT GFKPADDILI DCGSKSSSKT PDGRVFKSDQ ETIQYIEAKE DIQVSAPPSD
101: KVASPIYLTA RIFREEATYK FHLTRPGWHW VRLHFLAFPN DKFDLQQATF SVLTEKYVLL HNFKISNNNN DSQAAVQKEY LVNMTDAQFA LRFRPMKSSA
201: AFINAIEVVS APDELISDSG TALFPVIGFS GLSDYAYQSV YRVNVGGPLI MPQNDTLGRT WIPDKEFLKD ENLAKDVKTT PSAIKYPPEV TPLIAPQTVY
301: ATAVEMANSL TIDPNFNVSW NFPSNPSFNY LIRLHFCDIV SKSLNDLYFN VYINGKTAIS GLDLSTVAGN LAAPYYKDIV VNATLMGPEL QVQIGPMGED
401: TGTKNAILNG VEVLKMSNSV NSLDGEFGVD GRTTGMGKHG MVATAGFVMM FGAFIGLGAM VYKWKKRPQD WQKRNSFSSW LLPIHAGDST FMTSKGGSQK
501: SNFYNSTLGL GRYFSLSELQ EATKNFEASQ IIGVGGFGNV YIGTLDDGTK VAVKRGNPQS EQGITEFQTE IQMLSKLRHR HLVSLIGYCD ENSEMILVYE
601: FMSNGPFRDH LYGKNLAPLT WKQRLEICIG SARGLHYLHT GTAQGIIHRD VKSTNILLDE ALVAKVADFG LSKDVAFGQN HVSTAVKGSF GYLDPEYFRR
701: QQLTDKSDVY SFGVVLLEAL CARPAINPQL PREQVNLAEW AMQWKRKGLL EKIIDPHLAG TINPESMKKF AEAAEKCLED YGVDRPTMGD VLWNLEYALQ
801: LQEAFTQGKA EETENAKPDV VTPGSVPVSD PSPITPSVTT NEAATVPVPA KVEENSGTAV DEHSGTAMFT QFANLNGR

Arabidopsis Description

Probable receptor-like protein kinase At4g39110 [Source:UniProtKB/Swiss-Prot;Acc:Q9T020]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.