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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:plasma membrane
Plant-mPloc:cytosol, nucleus
PProwler:secretory
YLoc:plasma membrane
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G134400.1 Wheat plasma membrane 66.88 69.4
HORVU3Hr1G086590.1 Barley plasma membrane 66.99 69.36
TraesCS3B01G151200.1 Wheat mitochondrion, plasma membrane 67.2 69.2
TraesCS3A01G308100.1 Wheat mitochondrion, plasma membrane 66.56 68.61
KXG31830 Sorghum plasma membrane 62.29 66.78
HORVU3Hr1G024950.4 Barley plasma membrane 67.09 66.67
Solyc06g005230.1.1 Tomato plastid 23.61 59.09
CDY49572 Canola cytosol 18.16 58.02
PGSC0003DMT400043793 Potato cytosol, plastid 19.02 55.11
Solyc05g013300.1.1 Tomato cytosol 18.7 54.18
PGSC0003DMT400035099 Potato cytosol 20.94 51.72
PGSC0003DMT400043784 Potato cytosol 19.77 51.25
GSMUA_Achr9P04140_001 Banana plasma membrane 30.98 50.79
GSMUA_Achr11P... Banana cytosol 30.88 49.15
KRH10340 Soybean plasma membrane 37.93 47.91
Os06t0334300-01 Rice plasma membrane 42.84 46.68
VIT_06s0004g03920.t01 Wine grape plasma membrane 40.6 46.4
KRH24985 Soybean plasma membrane 41.45 46.36
KRG88684 Soybean plasma membrane 40.06 46.24
CDX80236 Canola plasma membrane 39.64 45.92
Os03t0281500-01 Rice plasma membrane 40.81 45.53
GSMUA_Achr5P28470_001 Banana plasma membrane 22.65 45.4
PGSC0003DMT400025093 Potato plasma membrane 40.06 45.24
Solyc11g072910.1.1 Tomato plasma membrane 40.28 45.2
PGSC0003DMT400040185 Potato plasma membrane 40.28 45.2
CDX99115 Canola plasma membrane 39.32 45.04
Bra033826.1-P Field mustard cytosol, plasma membrane, plastid 34.62 44.88
CDX68370 Canola plasma membrane 39.1 44.63
AT5G59700.1 Thale cress plasma membrane 39.53 44.63
CDX86076 Canola plasma membrane 38.89 44.5
AT3G46290.1 Thale cress plasma membrane 39.42 44.46
Bra018214.1-P Field mustard plasma membrane 39.42 44.3
Bra002541.1-P Field mustard plasma membrane 39.1 44.15
VIT_13s0067g03780.t01 Wine grape plasma membrane 38.89 44.01
CDX82981 Canola plasma membrane 39.21 44.0
Os01t0253000-01 Rice plasma membrane 19.55 41.88
Solyc05g054860.1.1 Tomato plasma membrane 34.51 39.83
PGSC0003DMT400060442 Potato plasma membrane 34.29 39.24
Os06t0126250-01 Rice plasma membrane 35.26 39.05
Os03t0759600-00 Rice plasma membrane, plastid 37.07 38.9
Os10t0534500-01 Rice plasma membrane 34.72 38.51
Os03t0124200-01 Rice plasma membrane 34.62 38.21
Os03t0333200-01 Rice plasma membrane 35.58 37.29
CDY07654 Canola plasma membrane 32.37 37.0
Os01t0769700-01 Rice plasma membrane 35.36 36.94
CDY24966 Canola plasma membrane 32.05 36.72
Bra000130.1-P Field mustard plasma membrane 32.05 36.67
Os07t0147600-01 Rice plasma membrane 33.23 36.63
Os04t0619600-01 Rice plasma membrane 32.91 36.49
AT2G39360.1 Thale cress plasma membrane 31.73 36.44
Os05t0318700-02 Rice plasma membrane 33.87 35.98
Os05t0280700-01 Rice plasma membrane 32.69 35.21
Os05t0317900-01 Rice plasma membrane 30.98 34.28
Os05t0317700-01 Rice plasma membrane 30.66 34.13
Os05t0318600-01 Rice plasma membrane 17.63 29.26
Os01t0253100-01 Rice plasma membrane 21.69 28.67
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20UniProt:A0A0P0UYG1
ProteinID:BAS70479.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domEnsemblPlantsGene:Os01g0155500EnsemblPlants:Os01t0155500-01
PFAM:PF07714PFAM:PF12819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003
PANTHER:PTHR27003:SF67InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_dom
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI000393B657SEG:seg::
Description
Catharanthus roseus receptor-like kinase1-like kinase 4Protein kinase, catalytic domain domain containing protein. (Os01t0155500-01)
Coordinates
chr1:+:2982542..2986094
Molecular Weight (calculated)
100328.0 Da
IEP (calculated)
6.100
GRAVY (calculated)
-0.009
Length
936 amino acids
Sequence
(BLAST)
001: EKTSCSTSCF GQGKTEAFPE LPAKVLIINC AIQIEVQIST AKMIKLRSAL GVLEILSVLC ISLVAAYTPV DNYLISCGSS VDTPVGQRLF VADDSGTVVL
101: TSPASDAVKA SPSAVSGLRD DAAMYQSARV FKAPSSYSFR IRDPGRHFVR LHFFPFVYLG YDLATASFKV STQDAVLLDG FAPAAAARGN ASTTTTTATA
201: AAVCEEFLLD VARDTLVVTF VPLAGRLAFV NAIEVVSVPD DLIGAADSSL STSDSTGQQL NPAVMPLQTV YRVNVGGQAV APDSDTLWRE WTSDQQLLVG
301: PAMTKGVSYN RTPNYLPGQA TANDAPAIVY ATGRELIIMT NSTDDGMKQM AWQFDVGRSA SYLIRFHFCD IVSSVPGRLH MNAYVDSSNA IQDLDLSAIG
401: NGTLAFPYYR DFVLAASTPS GKLAVYVGST SQKITTPAAI LNGLEIMRIL TTAGNVAVVE PTMPPGTKKK NNLAVVLGSV CGAFGFVSVA AALVIVLRRK
501: EEKEELRTPT TSQPSTAWMP LLGRISFRSA PPSAVGSRSP SFTIDTNANT PGGGATPGMA AAASSSPSYR FPFAALQDAT GNFDEGLVIG EGGFGKVYAA
601: VLQDGTKVAV KRANPESRQG AREFRTEIEM LSGLRHRHLV SLIGYCDEQD EMILLYEYME HGSLRSRLYG GGAATATATA LSWAQRLEAC AGAARGLLYL
701: HTATAKPVIH RDVKSSNILL DDGLTAKVAD FGLSKAGPDM DETHVSTAVK GSFGYVDPEY VRTRKLTAKS DVYSFGVVLL EALCARPVVD PRLPKPMVNL
801: VEWGLHWQRR DELEKIVDRR IAGTVRPAAL RKYGETVARC LADRGADRPA MEDVVWSLQF VARLQEVDGL DASDVSSLNM VHQLMPPTSL HARQRSAGES
901: ETGRTDADED SSVVDDDYTD ASMRGIFWQM VNVRGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.