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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86076 Canola plasma membrane 97.43 97.31
Bra018214.1-P Field mustard plasma membrane 98.78 96.88
CDX68370 Canola plasma membrane 87.15 86.83
CDX82981 Canola plasma membrane 88.49 86.69
CDY49572 Canola cytosol 30.36 84.64
AT3G46290.1 Thale cress plasma membrane 83.84 82.53
CDX80236 Canola plasma membrane 73.32 74.13
GSMUA_Achr9P04140_001 Banana plasma membrane 42.59 60.95
GSMUA_Achr11P... Banana cytosol 42.59 59.18
KXG20506 Sorghum plasma membrane 59.24 57.55
Zm00001d046838_P002 Maize plasma membrane 58.51 56.77
Os06t0334300-01 Rice plasma membrane 58.87 56.0
TraesCS7A01G340700.1 Wheat plasma membrane, plastid 58.63 55.96
TraesCS7B01G241900.1 Wheat plasma membrane 58.14 55.69
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 57.89 55.26
TraesCS7D01G338800.3 Wheat plastid 58.38 54.14
GSMUA_Achr5P28470_001 Banana plasma membrane 30.36 53.1
CDY43041 Canola cytosol 39.05 52.99
HORVU1Hr1G024070.1 Barley plasma membrane 53.86 52.32
EES17770 Sorghum plasma membrane 53.24 52.1
CDY67402 Canola plasma membrane 46.51 51.98
TraesCS1B01G130300.2 Wheat plasma membrane 53.49 51.72
Zm00001d037544_P001 Maize plasma membrane 52.88 51.67
TraesCS1A01G108100.1 Wheat plasma membrane 53.24 51.54
TraesCS1D01G110900.1 Wheat plasma membrane 50.43 51.44
CDY43828 Canola plasma membrane 50.06 51.0
Os03t0281500-01 Rice plasma membrane 52.14 50.77
CDY63832 Canola plasma membrane 52.39 50.18
Zm00001d028686_P001 Maize plasma membrane 51.65 49.59
TraesCS4B01G201600.1 Wheat plasma membrane 51.41 49.53
TraesCS4A01G102900.1 Wheat plasma membrane 51.29 49.35
HORVU4Hr1G058220.1 Barley plasma membrane 50.92 49.35
TraesCS4D01G202300.1 Wheat plasma membrane 51.04 49.12
CDX88063 Canola plasma membrane 49.08 48.37
EER95065 Sorghum plasma membrane 51.65 48.34
CDX80402 Canola plasma membrane 48.35 47.59
CDX87209 Canola plasma membrane 47.61 46.42
CDY56768 Canola plasma membrane 48.1 45.96
CDY12121 Canola plasma membrane 48.1 45.86
CDX90312 Canola plasma membrane 47.98 45.74
CDY42608 Canola plasma membrane 38.07 45.74
CDX72717 Canola plasma membrane 47.86 45.73
CDY41962 Canola plasma membrane 47.98 45.63
CDY15889 Canola plasma membrane 47.61 45.5
CDY24966 Canola plasma membrane 45.41 45.41
CDX99588 Canola plasma membrane 47.37 45.21
CDY07654 Canola plasma membrane 45.29 45.18
CDY46084 Canola mitochondrion, plasma membrane, plastid 29.74 43.78
CDY29022 Canola plasma membrane 42.47 43.21
CDY09559 Canola cytosol, plasma membrane, plastid 38.92 43.15
CDX78012 Canola plasma membrane 44.06 42.3
CDX90645 Canola plasma membrane 41.74 41.89
CDY33271 Canola plasma membrane 43.45 41.47
CDY02307 Canola plasma membrane 43.08 41.27
CDY16299 Canola plasma membrane 43.33 40.88
KXG31830 Sorghum plasma membrane 42.84 40.09
CDX76865 Canola plasma membrane 39.41 39.75
Os01t0155500-01 Rice plasma membrane 45.04 39.32
TraesCS3D01G134400.1 Wheat plasma membrane 43.33 39.25
TraesCS3A01G308100.1 Wheat mitochondrion, plasma membrane 43.45 39.1
CDY33885 Canola plasma membrane 39.9 38.76
TraesCS3B01G151200.1 Wheat mitochondrion, plasma membrane 42.96 38.61
HORVU3Hr1G086590.1 Barley plasma membrane 42.72 38.61
CDX86206 Canola plasma membrane 40.15 38.18
CDY05602 Canola plasma membrane 39.9 38.17
CDY21480 Canola plasma membrane 39.17 38.14
HORVU3Hr1G024950.4 Barley plasma membrane 42.72 37.05
CDY37883 Canola plasma membrane 35.86 36.95
CDX78036 Canola plasma membrane 38.19 35.99
CDY36996 Canola plasma membrane 38.31 35.89
CDX74492 Canola plasma membrane 38.68 35.71
CDY37884 Canola cytosol 37.7 35.52
CDX73714 Canola plasma membrane 44.31 30.78
CDY48660 Canola plasma membrane 21.05 29.4
CDY26624 Canola plasma membrane 37.82 21.58
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20GO:A0A078EAJ7
EnsemblPlants:CDX99115ProteinID:CDX99115ProteinID:CDX99115.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00107267001
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF94InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EF47FASEG:seg::::
Description
BnaA06g18060D
Coordinates
chrLK031908:-:429857..432358
Molecular Weight (calculated)
89776.7 Da
IEP (calculated)
6.784
GRAVY (calculated)
-0.176
Length
817 amino acids
Sequence
(BLAST)
001: MGVEKFIFVS TITCLICICH GFTPQDNYLI NCGSPANSTL MDRVFMSDKL ASNLLTSSTK PEILASQSSS SDVYQTARVF TGVATYKFSV ARGRHWVRLH
101: FNPFNYQSYQ MGSAKFAVST QTHVLLSDYT VNGSKVVKEY SLNVDTDDLV LTFTPSATSF AFVNAIEVIS VPDSLIASSP PPRLVGGSGM FQQSLSTQAF
201: ETVHRLNMGG SLVTPNNDTL TRTWQPDSDF LLSKNLANTV SKILSVKYVP GFATEETAPS SVYGTCTEMS NSSGDPTSNF NVTWEFDVDP GFQYYLRFHF
301: CDIVSLALNQ LYFNVYVDSM LAVMDVDLST YVNTLAGAYN MDFVTPSPKG TNKIRVSVGP SNVHTDYPDG IVNGLEIMKM NNSRGQLSAG TFVPGSTSSG
401: TKQKSVGLIV GATVGPLLAL VLLGGGCFVL CKKRKRGQDG HSKTWMPFSI NGMSVGSKVS YGTTLTSITT NANYRIPFAT VKEATNNFDE SRNIGVGGFG
501: KVYKGELNDG TKVAVKRGNP KSQQGLAEFR TEIEMLSQFR HRHLVSLIGY CDENNEMILV YEYMENGTVK SHLYGSGLPS LTWKQRLEIC IGAARGLHYL
601: HTGDSKPVIH RDVKSANILL DENFMAKVAD FGLSKTGPEL DQTHVSTAVK GSFGYLDPEY FRRQQLTEKS DVYSFGVVLF EVLCARPVID PTLPREMVNL
701: AEWAMKWQKK GQLDQIIDQS LRGNIRPDSL RKFAETGEKC LADYGVDRPS MGDVLWNLEY ALQLQEALPP QINNFSQGDT SVNVPGTTGR FEESSIDDLS
801: GVSMSKVFSQ LVKSEGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.