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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX99115 Canola plasma membrane 97.31 97.43
CDX68370 Canola plasma membrane 86.67 86.46
CDX82981 Canola plasma membrane 88.02 86.33
CDY49572 Canola cytosol 30.32 84.64
AT3G46290.1 Thale cress plasma membrane 84.6 83.37
CDX80236 Canola plasma membrane 72.62 73.51
GSMUA_Achr9P04140_001 Banana plasma membrane 42.05 60.25
GSMUA_Achr11P... Banana cytosol 42.42 59.01
KXG20506 Sorghum plasma membrane 58.56 56.96
Zm00001d046838_P002 Maize plasma membrane 57.95 56.29
Os06t0334300-01 Rice plasma membrane 58.31 55.53
TraesCS7A01G340700.1 Wheat plasma membrane, plastid 57.95 55.37
TraesCS7B01G241900.1 Wheat plasma membrane 57.46 55.1
HORVU7Hr1G081590.1 Barley plasma membrane, plastid 57.34 54.79
TraesCS7D01G338800.3 Wheat plastid 57.82 53.69
GSMUA_Achr5P28470_001 Banana plasma membrane 29.95 52.46
CDY43041 Canola cytosol 38.51 52.33
EES17770 Sorghum plasma membrane 53.18 52.1
HORVU1Hr1G024070.1 Barley plasma membrane 53.42 51.96
Zm00001d037544_P001 Maize plasma membrane 52.81 51.67
CDY67402 Canola plasma membrane 45.97 51.44
TraesCS1D01G110900.1 Wheat plasma membrane 50.12 51.19
TraesCS1A01G108100.1 Wheat plasma membrane 52.81 51.18
TraesCS1B01G130300.2 Wheat plasma membrane 52.81 51.12
CDY43828 Canola plasma membrane 49.27 50.25
Os03t0281500-01 Rice plasma membrane 51.34 50.06
CDY63832 Canola plasma membrane 51.71 49.59
Zm00001d028686_P001 Maize plasma membrane 51.1 49.12
TraesCS4B01G201600.1 Wheat plasma membrane 50.86 49.06
TraesCS4A01G102900.1 Wheat plasma membrane 50.73 48.88
HORVU4Hr1G058220.1 Barley plasma membrane 50.37 48.87
TraesCS4D01G202300.1 Wheat plasma membrane 50.37 48.53
CDX88063 Canola plasma membrane 48.41 47.77
EER95065 Sorghum plasma membrane 50.98 47.77
CDX80402 Canola plasma membrane 47.8 47.11
CDX87209 Canola plasma membrane 47.68 46.54
CDY42608 Canola plasma membrane 38.14 45.88
CDY41962 Canola plasma membrane 48.04 45.75
CDY12121 Canola plasma membrane 47.92 45.74
CDX90312 Canola plasma membrane 47.8 45.62
CDY56768 Canola plasma membrane 47.68 45.61
CDY24966 Canola plasma membrane 45.48 45.53
CDX72717 Canola plasma membrane 47.43 45.38
CDY07654 Canola plasma membrane 45.35 45.3
CDY15889 Canola plasma membrane 47.31 45.26
CDX99588 Canola plasma membrane 47.07 44.98
CDY46084 Canola mitochondrion, plasma membrane, plastid 29.83 43.96
CDY09559 Canola cytosol, plasma membrane, plastid 38.63 42.88
CDY29022 Canola plasma membrane 42.05 42.84
CDX78012 Canola plasma membrane 43.52 41.83
CDX90645 Canola plasma membrane 41.56 41.77
CDY33271 Canola plasma membrane 42.91 41.0
CDY02307 Canola plasma membrane 42.66 40.91
CDY16299 Canola plasma membrane 42.91 40.53
KXG31830 Sorghum plasma membrane 42.79 40.09
CDX76865 Canola plasma membrane 39.0 39.38
TraesCS3D01G134400.1 Wheat plasma membrane 42.91 38.91
Os01t0155500-01 Rice plasma membrane 44.5 38.89
TraesCS3A01G308100.1 Wheat mitochondrion, plasma membrane 43.03 38.77
CDY33885 Canola plasma membrane 39.73 38.64
HORVU3Hr1G086590.1 Barley plasma membrane 42.42 38.38
CDY21480 Canola plasma membrane 39.36 38.38
TraesCS3B01G151200.1 Wheat mitochondrion, plasma membrane 42.54 38.28
CDY05602 Canola plasma membrane 39.73 38.06
CDX86206 Canola plasma membrane 39.85 37.95
HORVU3Hr1G024950.4 Barley plasma membrane 42.42 36.84
CDY37883 Canola plasma membrane 35.45 36.57
CDX78036 Canola plasma membrane 37.78 35.64
CDX74492 Canola plasma membrane 38.51 35.59
CDY36996 Canola plasma membrane 37.78 35.44
CDY37884 Canola cytosol 37.41 35.29
CDX73714 Canola plasma membrane 43.77 30.44
CDY48660 Canola plasma membrane 20.78 29.06
CDY26624 Canola plasma membrane 37.29 21.3
Protein Annotations
Gene3D:1.10.510.10MapMan:11.10.2.4.2MapMan:18.4.1.16Gene3D:2.60.120.430Gene3D:3.30.200.20GO:A0A078D9Z1
EnsemblPlants:CDX86076ProteinID:CDX86076ProteinID:CDX86076.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00144062001
InterPro:IPR000719InterPro:Kinase-like_dom_sfInterPro:Malectin-like_Carb-bd_domPFAM:PF07714PFAM:PF12819ScanProsite:PS00107
ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27003PANTHER:PTHR27003:SF94InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EEB170:::::
Description
BnaC03g55910D
Coordinates
chrLK031844:+:967693..970820
Molecular Weight (calculated)
89922.9 Da
IEP (calculated)
6.672
GRAVY (calculated)
-0.162
Length
818 amino acids
Sequence
(BLAST)
001: MGVEKFGTFI FVSTITCLIC ICHGFTPQDN YLINCGSTAN STLMDRVFMS DKLASNLLTS STKPEILASQ SNSSDVYQTA RVFTGVATYK FSVARGRHWV
101: RLHFNPFNYQ NYQMGSAKFA VSTQTHVLLS DYTVNGSKVV KEYSLNVDTD DLVLTFTPSA SSFAFVNAVE VISVPDALIP SSPAPRLVGG SGMFQQSLST
201: QAFETIHRLN MGGSLVTPNN DTLTRTWQPD SDFLLSKNLA NTVSKILSVK FVPGFATEDT APSTVYGTCT EMNSSGDPTS NFNVTWEFDV DPGFQYYLRF
301: HFCDIVSVAL NQLYFNVYVD SMLAVMDVDL STYVNTLAGA YNMDFVTPSP KGTNKIRVSI GPSNVHTDYP DGIVNGLEIM KMNNSRGQLS TGTFVPGSSS
401: SGTKQKSVGL IVGATIGPLL ALVLLGGCFV LCKKRKRGQD GHSKTWMPFS INGMSVGSKV SYGTTLTSIT TNANYRIPFA TVKDATNNFD ESRNIGVGGF
501: GKVYKGELND GTKVAVKRGN PKSQQGLAEF RTEIEMLSQF RHRHLVSLIG YCDENNEMIL VYEYMENGTV KSHLYGSGLP SLTWKQRLEI CIGAARGLHY
601: LHTGDSKPVI HRDVKSANIL LDENFMAKVA DFGLSKTGPE LDQTHVSTAV KGSFGYLDPE YFRRQQLTEK SDVYSFGVVL FEVLCARPVI DPTLPREMVN
701: LAEWAMKWQK KGQLDQIIDQ SLRGNIRPDS LRKFAETGEK CLADYGVDRP SMGDVLWNLE YALQLQEALP PQINNFSQGD TSVNVPGTTG LFEESSIDDL
801: SGVSMSKVFS QLVKSEGR
Best Arabidopsis Sequence Match ( AT3G46290.1 )
(BLAST)
001: MGIEKFETFI LISTISILLC ICHGFTPVDN YLINCGSPTN GTLMGRIFLS DKLSSKLLTS SKEILASVGG NSGSDIYHTA RVFTEVSSYK FSVTRGRHWV
101: RLYFNPFDYQ NFKMGSAKFA VSSQSHVLLS DFTVTSSKVV KEYSLNVTTN DLVLTFTPSS GSFAFVNAIE VISIPDTLIT GSPRFVGNPA QFPDMSMQGL
201: ETIHRVNMGG PLVASNNDTL TRTWVPDSEF LLEKNLAKSM SKFSTVNFVP GYATEDSAPR TVYGSCTEMN SADNPNSIFN VTWEFDVDPG FQYYFRFHFC
301: DIVSLSLNQL YFNLYVDSMV AATDIDLSTL VDNTLAGAYS MDFVTQTPKG SNKVRVSIGP STVHTDYPNA IVNGLEIMKM NNSKGQLSTG TFVPGSSSSS
401: KSNLGLIVGS AIGSLLAVVF LGSCFVLYKK RKRGQDGHSK TWMPFSINGT SMGSKYSNGT TLTSITTNAN YRIPFAAVKD ATNNFDESRN IGVGGFGKVY
501: KGELNDGTKV AVKRGNPKSQ QGLAEFRTEI EMLSQFRHRH LVSLIGYCDE NNEMILIYEY MENGTVKSHL YGSGLPSLTW KQRLEICIGA ARGLHYLHTG
601: DSKPVIHRDV KSANILLDEN FMAKVADFGL SKTGPELDQT HVSTAVKGSF GYLDPEYFRR QQLTDKSDVY SFGVVLFEVL CARPVIDPTL PREMVNLAEW
701: AMKWQKKGQL DQIIDQSLRG NIRPDSLRKF AETGEKCLAD YGVDRPSMGD VLWNLEYALQ LQEAVIDGEP EDNSTNMIGE LPPQINNFSQ GDTSVNVPGT
801: AGRFEESSID DLSGVSMSKV FSQLVKSEGR
Arabidopsis Description
HERK1Receptor-like protein kinase HERK 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LX66]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.