CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028425.1-P	Field mustard	plasma membrane	94.95	94.85
CDX78036	Canola	plasma membrane	81.65	82.12
CDX74492	Canola	plasma membrane	77.29	76.16
CDY37884	Canola	cytosol	74.2	74.63
AT5G39000.1	Thale cress	plasma membrane	73.39	73.31
AT5G38990.1	Thale cress	plasma membrane	72.71	72.05
CDY37883	Canola	plasma membrane	65.25	71.75
CDY49572	Canola	cytosol	17.55	52.22
VIT_14s0068g00010.t01	Wine grape	cytosol	48.62	48.79
CDY29022	Canola	plasma membrane	44.38	48.19
CDX90645	Canola	plasma membrane	44.5	47.67
CDX78012	Canola	plasma membrane	46.45	47.59
PGSC0003DMT400003461	Potato	plasma membrane	47.36	47.31
VIT_01s0011g00280.t01	Wine grape	plasma membrane	47.02	47.13
CDY33271	Canola	plasma membrane	46.1	46.96
Solyc02g089090.2.1	Tomato	plasma membrane	46.45	46.61
CDY16299	Canola	plasma membrane	45.76	46.07
PGSC0003DMT400003464	Potato	plasma membrane	44.04	44.86
CDY43041	Canola	cytosol	28.78	41.69
CDX86206	Canola	plasma membrane	39.91	40.51
CDY33885	Canola	plasma membrane	38.99	40.43
CDY05602	Canola	plasma membrane	38.88	39.7
CDY67402	Canola	plasma membrane	33.14	39.53
CDY43828	Canola	plasma membrane	35.78	38.9
CDY09559	Canola	cytosol, plasma membrane, plastid	32.8	38.81
CDX99115	Canola	plasma membrane	35.89	38.31
CDX88063	Canola	plasma membrane	36.12	38.0
CDX80236	Canola	plasma membrane	35.09	37.87
CDX86076	Canola	plasma membrane	35.44	37.78
CDX68370	Canola	plasma membrane	35.44	37.68
CDX80402	Canola	plasma membrane	35.78	37.59
CDY63832	Canola	plasma membrane	36.7	37.51
CDX82981	Canola	plasma membrane	35.78	37.41
CDX87209	Canola	plasma membrane	35.32	36.75
CDY02307	Canola	plasma membrane	35.89	36.69
CDY42608	Canola	plasma membrane	28.1	36.03
CDY46084	Canola	mitochondrion, plasma membrane, plastid	22.82	35.86
CDY48660	Canola	plasma membrane	23.85	35.56
CDX99588	Canola	plasma membrane	34.52	35.16
CDY12121	Canola	plasma membrane	34.52	35.12
CDY41962	Canola	plasma membrane	34.52	35.04
CDX90312	Canola	plasma membrane	34.4	35.01
CDY15889	Canola	plasma membrane	34.29	34.97
CDY56768	Canola	plasma membrane	34.17	34.85
CDX72717	Canola	plasma membrane	34.06	34.74
CDX73714	Canola	plasma membrane	45.99	34.1
CDY07654	Canola	plasma membrane	31.77	33.82
CDY24966	Canola	plasma membrane	31.65	33.78
CDX76865	Canola	plasma membrane	30.05	32.35
CDY21480	Canola	plasma membrane	29.93	31.11
CDY26624	Canola	plasma membrane	39.33	23.95

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	GO:A0A078HGY1
UniProt:A0A078HGY1	EnsemblPlants:CDY36996	ProteinID:CDY36996	ProteinID:CDY36996.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00063167001
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF246	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDF3E4	SEG:seg

Description

BnaC06g12670DBnaC06g12670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGY1]

Coordinates

chrLK032389:+:3838..6573

Molecular Weight (calculated)

96829.2 Da

IEP (calculated)

5.800

GRAVY (calculated)

-0.186

Length

872 amino acids

Sequence
(BLAST)

001: MISHALLILS VLFSSTVPGQ GATAAYVPID LFLFNCGANS DVSDRGRNWT AENRKTLPSN SGDASFSSDA SFQESGVPLV PYKTARIFRS DFTYSFPVSP
101: GWKFLRLYFY PTRYGSGFDA VNSFFSVNVN GFTLLKNFSA DLTVKASKPE SKSLIKEFIV PVYQTLNLTF TPSKSLAFVN GIEIVSMPDR FYSKGGFDDV
201: ITNVGSSNVD FIIDNTTAFE TVYRLNVGGQ EVDGDTTGML RRWLSDDESI LSENSGIKPE VEGVAINYTE KTPAYVAPED VYKTSRSMGN IDNPKLNLNF
301: NLTWLFMVDA GFTYLVRLHF CETLPDLTGP GQRIFSIFIN SQMAKPETDV IYLSGGSRKP MYLDFIVYVG DESGKSRDLR LDLHPFNEVL PKYYDAILNG
401: VEILKLNVSD GNLSGPNPFP TPNSIPQDVG NDKGMSHVLV IALGVVGSVV VLAMFVVVVV LIIKRRKKKK KTNELNDPWT HLPLVTGSSH TRSATSLPSD
501: LCRRFTIEEI KSATNNFEKE LIVGVGGFGP VYKGRIDGGT TLVAVKRLEI SSNQGAKEFD TELEMLTMLR HIHLVSLIGY CEDENEMVLV YEYMPHGTLR
601: DHLYKRNKAF DTPLSWTRRL EICIGAARGL QYLHTGAKHM IIHRDIKTTN ILLDENYIAK VSDFGLSKVG PTSASQTHVS TVVKGSFGYL DPEYYRRQVL
701: TEKSDVYSFG VVLFEVLCCR PVKLENVPRE EADLVRWVKS NYKNGTADQI VDADLTADIT PVSLEKFCEI AVRCVQDRGT ERPPMNDVVW ALEFALQLHE
801: TATNKNGVDS LDLPTRGEVG TTTEGEDDLF SRTTGHVSKS TTTNDDSACL ARDEKSGSSW GVFSEIKEPK AR

Best Arabidopsis Sequence Match ( AT5G39000.1 )
(BLAST)

001: MIRHALLIFS ILVSTPIVGE GATSTYEPTD VFLFNCGDTS NNVDVSGRNW TAENQKILSS NLVNASFTAQ ASYQESGVSQ IPYMTARIFR SEFTYSFPVT
101: PGSNFLRLYF YPTRYGSQFN AVKSFFSVKV NGFTLLNNFS ADLTVKASKP QTEFIIKEFI IPVYQTLNLT FTPSLDSLAF VNGIEIVSIP NRFYSKGGFD
201: DVITNVGSSV DFHIENSTAF ETVYRLNVGG KTVGDSGMFR RWVSDDEIIL SESSGISPIV PDIKINYTEK TPSYVAPDDV YATSRSMGNA DHPEQNLNFN
301: LTWLFTVDAG FSYLVRLHFC ETLSEVNKEG QRVFSIFIEN QTATLEMDVF RMSGGSWIPM YLDYTVIAGS GSGRRHDLRL DLHPLVSINP KYYDAILNGV
401: EILKMNDPDG NLAGPNPDPL VSPDLIPNRA TPRIRKNKSH ILPITLAVVG SLVVLAMFVV GVLVIMKKKK KSKPSTNSSW CPLPHGTDST NTKPAKSLPA
501: DLCRRFSIFE IKSATNDFED KLIIGVGGFG SVYKGQIDGG ATLVAVKRLE ITSNQGAKEF ETELEMLSKL RHVHLVSLIG YCDEDNEMVL VYEYMPHGTL
601: KDHLFRRDKT SDPPLSWKRR LEICIGAARG LQYLHTGAKY TIIHRDIKTT NILLDENFVT KVSDFGLSRV GPTSASQTHV STVVKGTFGY LDPEYYRRQV
701: LTEKSDVYSF GVVLLEVLCC RPIRMQSVPP EQADLIRWVK SNYRRGTVDQ IIDSDLSADI TSTSLEKFCE IAVRCVQDRG MERPPMNDVV WALEFALQLH
801: ETAKKKNDNV ESLDLMPSGE VGTTTDGEDD LFSRTTGHVG KSTTTDDSVL VVGDERSGSS WGVFSEINEP KAR

Arabidopsis Description

Putative receptor-like protein kinase At5g39000 [Source:UniProtKB/Swiss-Prot;Acc:Q9FID8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.