Factsheet for VIT_10s0003g04990.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36805	Soybean	plasma membrane	70.62	69.95
CDY09559	Canola	cytosol, plasma membrane, plastid	59.48	68.11
Solyc02g069970.2.1	Tomato	plasma membrane	52.25	66.02
PGSC0003DMT400054599	Potato	plasma membrane	67.3	65.44
AT1G30570.1	Thale cress	plasma membrane	65.05	64.66
Bra032404.1-P	Field mustard	plasma membrane	65.05	64.36
CDY02307	Canola	plasma membrane	65.05	64.36
EES12876	Sorghum	plasma membrane	54.98	54.78
Os04t0619600-01	Rice	plasma membrane	54.38	54.38
TraesCS2D01G463600.1	Wheat	plasma membrane	54.38	54.32
TraesCS2A01G463000.1	Wheat	plasma membrane	54.38	54.32
HORVU2Hr1G103780.1	Barley	plasma membrane	54.27	54.2
TraesCS2B01G484700.1	Wheat	plasma membrane	54.27	54.2
VIT_07s0129g00950.t01	Wine grape	cytosol	22.16	54.05
Zm00001d002282_P001	Maize	plastid	54.15	53.58
VIT_08s0040g00010.t01	Wine grape	mitochondrion	26.66	52.2
Os07t0147600-01	Rice	plasma membrane	52.37	52.06
KXG34391	Sorghum	plasma membrane	51.9	51.71
HORVU2Hr1G038950.5	Barley	plasma membrane, vacuole	50.59	51.02
TraesCS2B01G272800.1	Wheat	plasma membrane	50.0	50.06
TraesCS2D01G253800.1	Wheat	plasma membrane	49.88	49.82
TraesCS2A01G253200.1	Wheat	plasma membrane	49.88	49.7
VIT_00s1542g00010.t01	Wine grape	plasma membrane	25.36	48.31
VIT_17s0000g06620.t01	Wine grape	plasma membrane	29.62	48.17
VIT_00s1542g00020.t01	Wine grape	plasma membrane	22.51	46.12
Zm00001d018789_P001	Maize	mitochondrion	48.58	44.71
VIT_19s0014g03400.t01	Wine grape	plasma membrane	43.48	43.85
VIT_01s0244g00090.t01	Wine grape	plastid	29.15	43.69
VIT_06s0004g03920.t01	Wine grape	plasma membrane	42.18	43.47
VIT_16s0050g01020.t01	Wine grape	plastid	38.98	42.45
VIT_05s0077g00970.t01	Wine grape	plasma membrane	42.77	42.12
VIT_07s0005g01640.t01	Wine grape	plasma membrane	42.3	41.66
VIT_03s0038g04340.t01	Wine grape	plasma membrane	41.0	40.9
VIT_13s0067g03780.t01	Wine grape	plasma membrane	39.81	40.63
VIT_07s0129g00970.t01	Wine grape	plasma membrane	38.74	38.84
VIT_14s0083g01210.t01	Wine grape	cytosol	37.91	38.46
VIT_07s0129g00990.t01	Wine grape	plasma membrane	38.03	38.26
VIT_07s0129g00960.t01	Wine grape	plasma membrane	37.2	37.83
VIT_07s0129g00870.t01	Wine grape	plasma membrane	36.37	36.99
VIT_07s0129g00910.t01	Wine grape	plasma membrane	36.14	36.66
VIT_07s0129g00890.t01	Wine grape	plasma membrane	31.04	36.64
VIT_14s0068g00010.t01	Wine grape	cytosol	37.68	36.59
VIT_07s0129g00880.t01	Wine grape	plasma membrane	35.78	36.43
VIT_07s0129g00920.t01	Wine grape	cytosol, mitochondrion, plasma membrane, vacuole	36.85	35.95
VIT_14s0068g00030.t01	Wine grape	plasma membrane	37.8	35.76
VIT_14s0068g00090.t01	Wine grape	plasma membrane	36.49	35.69
VIT_01s0011g00280.t01	Wine grape	plasma membrane	35.78	34.71

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100247404	wikigene:100247404	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430
Gene3D:3.30.200.20	EMBL:AM430067	ProteinID:CAN73534	ProteinID:CAN73534.1	ProteinID:CBI31024	ProteinID:CBI31024.3
UniProt:D7TKK2	EMBL:FN595992	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009653	GO:GO:0009719	GO:GO:0009741
GO:GO:0009826	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0040007	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100247404	wikigene:LOC100247404	InterPro:Malectin-like_Carb-bd_dom	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27003	PANTHER:PTHR27003:SF135	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0001BE363A	ArrayExpress:VIT_10s0003g04990	EnsemblPlantsGene:VIT_10s0003g04990	EnsemblPlants:VIT_10s0003g04990.t01	RefSeq:XP_002264211	RefSeq:XP_002264211.2
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:8904492..8907378

Molecular Weight (calculated)

93859.0 Da

IEP (calculated)

6.357

GRAVY (calculated)

-0.229

Length

844 amino acids

Sequence
(BLAST)

001: MEVWGLILVV MVSVFVGNGE AQAKSLLINC GTNSSVNVDG RRWVGDLAPD NNLTLSSLGV AASTDTFSGD TTFAQLYETA RIFPDSLNYT ASLNQGNYSV
101: RLHFYPFSFE KYNTNESSFS VTANGLKLAS QLNVPGEISH KNSYLQSSGS NSSSFSMIKE YFLTVDSGLL VIEFAPTKGS FGFINAIEIV PVVDNLFFSS
201: VSKVGGTNSV LNLSGRGIEA MYRLNVGGPE ITPDQDLDLW RTWDVDSSYM FTANAGSEVH NSSNITYASM NDSVVAPLAV YETARSMSNT EVLEKRFNMS
301: WKFEVDPDFE YLIRLHFCEL FYERANQRSF RIYINNRTAA DNFDVFLRAG GMNKAYHQDF LDMVSSKINT LWIQLGPDTT VGASGTDAIL NGLEIFKLSR
401: NGNLAYVERF DSTKSSAGSK TSKTQTLWVG LGAGVASIAM MAVIFSLIFY FCKRWRKKSS ATKNKSPGWR PLFLHVNSTN AKGMSQSLSV SLASNRAGKR
501: FTLTEIRAAT NNFDESLVIG VGGFGKVYKG EIDDGTPAAI KRANPQSEQG LAEFQTEIEM LSKLRHRHLV SMIGFCEEQN EMILVYEYMA NGTLRSHLFG
601: SELPPLTWKQ RLEACIGAAR GLHYLHTGAE RGIIHRDVKT TNILIDENFV AKMADFGLSK TGPAWEHTHV STAVKGSFGY LDPEYFRRQQ LTEKSDVYSF
701: GVVLFEVVCA RAVINPSLPR DQINLAEWAM HWQHQRSLET IIDPHLKGNY SPDSLRKFGE IAEKCLADEG KNRPTMGEVL WHLEYVLQLH EAWLRTNVGE
801: NSFSSSQALG NLEEGLESAH LDEENEISLK MKQKRESATR GINA

Best Arabidopsis Sequence Match ( AT1G30570.1 )
(BLAST)

001: MSKLRKKYLE HLLCVLIFFT YVIGYGEAQS KSFLVDCGSN ATTEVDGRTW VGDLSPNKSV TLQGFDAITA STSKGSSVYA EIYKTARVFD AVLNYTFEGI
101: TQGNYFVRLH FSPFAIENHN VNESSFSVFA DGLRLMLDIN IAGEIAHKNL ILESTGHNAT ASSLVKEFLL PTGPGKLVLS FIPEKGSFGF VNAIEIVSVD
201: DKLFKESVTK VGGSEVELGL GGRGIETMYR LNVGGPKLGP SKDLKLYRTW ETDLSYMVIE NAGVEVKNSS NITYALADDS PVAPLLVYET ARMMSNTEVL
301: EKRFNISWKF EVDPNFDYLV RLHFCELLVD KQNQRIFRIY INNQTAAGNF DIFAHAGGKN KGIYQDYLDP VSSKNDVLWI QLGPDSSVGA SGDALLSGLE
401: IFKLSKNGNL AHLIRFDSTG HSVSDSKMRI IWISVGAGIA IIIFFVFLGI LVVCLCKKRR SKSDESKNNP PGWRPLFLHV NNSTANAKAT GGSLRLNTLA
501: ASTMGRKFTL AEIRAATKNF DDGLAIGVGG FGKVYRGELE DGTLIAIKRA TPHSQQGLAE FETEIVMLSR LRHRHLVSLI GFCDEHNEMI LVYEYMANGT
601: LRSHLFGSNL PPLSWKQRLE ACIGSARGLH YLHTGSERGI IHRDVKTTNI LLDENFVAKM SDFGLSKAGP SMDHTHVSTA VKGSFGYLDP EYFRRQQLTE
701: KSDVYSFGVV LFEAVCARAV INPTLPKDQI NLAEWALSWQ KQRNLESIID SNLRGNYSPE SLEKYGEIAE KCLADEGKNR PMMGEVLWSL EYVLQIHEAW
801: LRKQNGENSF SSSQAVEEAP ESFTLPACSN QDSSETEQSQ TGSALHNSA

Arabidopsis Description

HERK2Probable receptor-like protein kinase At1g30570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA72]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.