Factsheet for Zm00001d002282_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12876	Sorghum	plasma membrane	91.91	92.56
Os04t0619600-01	Rice	plasma membrane	81.48	82.35
TraesCS2D01G463600.1	Wheat	plasma membrane	80.42	81.18
TraesCS2A01G463000.1	Wheat	plasma membrane	79.95	80.71
HORVU2Hr1G103780.1	Barley	plasma membrane	79.84	80.59
TraesCS2B01G484700.1	Wheat	plasma membrane	79.6	80.36
CDY09559	Canola	cytosol, plasma membrane, plastid	47.95	55.5
VIT_10s0003g04990.t01	Wine grape	plasma membrane	53.58	54.15
KRH36805	Soybean	plasma membrane	52.05	52.11
Bra032404.1-P	Field mustard	plasma membrane	51.7	51.7
CDY02307	Canola	plasma membrane	51.7	51.7
PGSC0003DMT400054599	Potato	plasma membrane	51.58	50.69
AT1G30570.1	Thale cress	plasma membrane	50.18	50.41
Solyc02g069970.2.1	Tomato	plasma membrane	38.8	49.55
Zm00001d018789_P001	Maize	mitochondrion	52.17	48.53
Zm00001d047533_P001	Maize	mitochondrion, plasma membrane	42.09	40.43
Zm00001d029047_P001	Maize	plasma membrane	41.15	39.62
Zm00001d034089_P001	Maize	plasma membrane	38.92	39.48
Zm00001d045515_P001	Maize	plasma membrane	39.16	39.25
Zm00001d046838_P002	Maize	plasma membrane	38.57	39.07
Zm00001d002175_P001	Maize	plasma membrane	40.45	38.46
Zm00001d037839_P001	Maize	plasma membrane	39.04	38.28
Zm00001d028686_P001	Maize	plasma membrane	37.87	37.96
Zm00001d040269_P001	Maize	plasma membrane	38.45	37.44
Zm00001d037544_P001	Maize	plasma membrane	36.69	37.44
Zm00001d027436_P001	Maize	mitochondrion	34.82	37.08
Zm00001d008347_P001	Maize	plasma membrane	38.22	36.92
Zm00001d035992_P001	Maize	plasma membrane	37.87	32.46

Protein Annotations

Gene3D:1.10.510.10	MapMan:11.10.2.4.2	MapMan:18.4.1.16	Gene3D:2.60.120.430	Gene3D:3.30.200.20	UniProt:A0A1D6DZ77
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	InterPro:Malectin-like_Carb-bd_dom
ProteinID:ONM13830.1	PFAM:PF07714	PFAM:PF12819	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27003	PANTHER:PTHR27003:SF137	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI0002210F6B	EnsemblPlantsGene:Zm00001d002282	EnsemblPlants:Zm00001d002282_P001
EnsemblPlants:Zm00001d002282_T001	SEG:seg	:	:	:	:

Description

Probable receptor-like protein kinase

Coordinates

chr2:+:9498177..9500738

Molecular Weight (calculated)

94647.2 Da

IEP (calculated)

6.936

GRAVY (calculated)

-0.202

Length

853 amino acids

Sequence
(BLAST)

001: MSPFVLAVVS VAFLSLRFLQ AHGSGLLLSC GSNSTVDADG RRWIGDITPE GNFTLSSPGL AASLVGKSSS DEIFGPLYSS ARFFNAATWY TISVLPGSYC
101: VRLHFFPSTF GNLSANNSVF DVTANDFKLV SKFNASEEIA WRASVSNSVT SAVVKEYFLV VGARGLSIEF DPRPGSFAFV NAIEVMLTPD NLFNDTVSKV
201: GSPVTQLPLG LRGRGVETMY RLNIGGPALK SPSDQYLHRP WYTDEAFMFS TNAAQTVSNA SSIVYVSSNE STIAPIDVYE TARIMGNNMV VDKRFNVSWR
301: FYVHPNFDYL VRLHFCELVY DKPSQRIFKI YINNKTAAES YDVYARAGGI NKAYHEDFFD NSTQQADTLW LQLGPDSMAS ASGADALLNG VEIFKLSKDS
401: DLSYVLGHID TGNQMDSSKG GKIKGLWEEL GIGSASFVAV TSVVLFSWCY IRKKRKAVNK EAPPGWHPLV LHEAMKSTTD ARAASKSSSA RNASPIGHRM
501: GRRFGIAEIR AATKNFDESL VIGTGGFGKV YKGEIDEGAT VAIKRANTLC GQGLKEFETE IEMLSKLRHR HLVAMIGYCE EQKEMILVYE YMAKGTLRSH
601: LYGSSLPPLT WKQRIDACIG AARGLHYLHT GADRGIIHRD VKTTNILLDD SFVAKIADFG LSRTGPTLDQ THVSTAVRGS FGYLDPEYFR RQQLTQKSDV
701: YSFGVVLFEV ACARPVIDPT LPKDQINLAE WAMRWQRQRS LEAILDPRLD GDFSPESLKK FGEIAEKCLA DDGRSRPSMG EVLWHLEYVL QLHEAYRRNV
801: VESESFGSGE LGFADIPSFF SLPHVIREGE EEHHHRSKKP SSIREELDTR ENF

Best Arabidopsis Sequence Match ( AT1G30570.1 )
(BLAST)

001: MSKLRKKYLE HLLCVLIFFT YVIGYGEAQS KSFLVDCGSN ATTEVDGRTW VGDLSPNKSV TLQGFDAITA STSKGSSVYA EIYKTARVFD AVLNYTFEGI
101: TQGNYFVRLH FSPFAIENHN VNESSFSVFA DGLRLMLDIN IAGEIAHKNL ILESTGHNAT ASSLVKEFLL PTGPGKLVLS FIPEKGSFGF VNAIEIVSVD
201: DKLFKESVTK VGGSEVELGL GGRGIETMYR LNVGGPKLGP SKDLKLYRTW ETDLSYMVIE NAGVEVKNSS NITYALADDS PVAPLLVYET ARMMSNTEVL
301: EKRFNISWKF EVDPNFDYLV RLHFCELLVD KQNQRIFRIY INNQTAAGNF DIFAHAGGKN KGIYQDYLDP VSSKNDVLWI QLGPDSSVGA SGDALLSGLE
401: IFKLSKNGNL AHLIRFDSTG HSVSDSKMRI IWISVGAGIA IIIFFVFLGI LVVCLCKKRR SKSDESKNNP PGWRPLFLHV NNSTANAKAT GGSLRLNTLA
501: ASTMGRKFTL AEIRAATKNF DDGLAIGVGG FGKVYRGELE DGTLIAIKRA TPHSQQGLAE FETEIVMLSR LRHRHLVSLI GFCDEHNEMI LVYEYMANGT
601: LRSHLFGSNL PPLSWKQRLE ACIGSARGLH YLHTGSERGI IHRDVKTTNI LLDENFVAKM SDFGLSKAGP SMDHTHVSTA VKGSFGYLDP EYFRRQQLTE
701: KSDVYSFGVV LFEAVCARAV INPTLPKDQI NLAEWALSWQ KQRNLESIID SNLRGNYSPE SLEKYGEIAE KCLADEGKNR PMMGEVLWSL EYVLQIHEAW
801: LRKQNGENSF SSSQAVEEAP ESFTLPACSN QDSSETEQSQ TGSALHNSA

Arabidopsis Description

HERK2Probable receptor-like protein kinase At1g30570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA72]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.