Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- vacuole 4
- plasma membrane 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09559 | Canola | cytosol, plasma membrane, plastid | 78.09 | 89.96 |
| CDY02307 | Canola | plasma membrane | 88.22 | 87.81 |
| Bra032404.1-P | Field mustard | plasma membrane | 88.22 | 87.81 |
| VIT_10s0003g04990.t01 | Wine grape | plasma membrane | 64.66 | 65.05 |
| KRH36805 | Soybean | plasma membrane | 62.78 | 62.56 |
| Solyc02g069970.2.1 | Tomato | plasma membrane | 47.0 | 59.73 |
| PGSC0003DMT400054599 | Potato | plasma membrane | 60.54 | 59.22 |
| EES12876 | Sorghum | plasma membrane | 51.59 | 51.71 |
| Os04t0619600-01 | Rice | plasma membrane | 50.41 | 50.71 |
| Os07t0147600-01 | Rice | plasma membrane | 50.65 | 50.65 |
| HORVU2Hr1G103780.1 | Barley | plasma membrane | 50.29 | 50.53 |
| TraesCS2A01G463000.1 | Wheat | plasma membrane | 50.18 | 50.41 |
| TraesCS2B01G484700.1 | Wheat | plasma membrane | 49.94 | 50.18 |
| TraesCS2D01G463600.1 | Wheat | plasma membrane | 49.94 | 50.18 |
| Zm00001d002282_P001 | Maize | plastid | 50.41 | 50.18 |
| KXG34391 | Sorghum | plasma membrane | 49.12 | 49.23 |
| TraesCS2B01G272800.1 | Wheat | plasma membrane | 48.76 | 49.11 |
| TraesCS2D01G253800.1 | Wheat | plasma membrane | 48.65 | 48.88 |
| TraesCS2A01G253200.1 | Wheat | plasma membrane | 48.65 | 48.76 |
| HORVU2Hr1G038950.5 | Barley | plasma membrane, vacuole | 47.82 | 48.51 |
| Zm00001d018789_P001 | Maize | mitochondrion | 46.88 | 43.4 |
| AT5G59700.1 | Thale cress | plasma membrane | 40.28 | 41.25 |
| AT5G54380.1 | Thale cress | plasma membrane | 41.46 | 41.17 |
| AT5G61350.1 | Thale cress | plasma membrane | 40.52 | 40.86 |
| AT3G46290.1 | Thale cress | plasma membrane | 39.69 | 40.6 |
| AT3G51550.1 | Thale cress | plasma membrane | 41.93 | 39.78 |
| AT5G24010.1 | Thale cress | plasma membrane | 38.28 | 39.44 |
| AT2G21480.1 | Thale cress | plasma membrane | 39.93 | 38.92 |
| AT4G39110.1 | Thale cress | plasma membrane | 40.16 | 38.84 |
| AT5G28680.1 | Thale cress | plasma membrane | 37.93 | 37.53 |
| AT3G04690.1 | Thale cress | plasma membrane | 37.22 | 37.18 |
| AT2G39360.1 | Thale cress | plasma membrane | 35.22 | 36.69 |
| AT5G39000.1 | Thale cress | plasma membrane | 37.1 | 36.08 |
| AT2G23200.1 | Thale cress | plasma membrane | 34.04 | 34.65 |
| AT5G38990.1 | Thale cress | plasma membrane | 35.81 | 34.55 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:11.10.2.4.2 | MapMan:18.4.1.16 | Gene3D:2.60.120.430 | Gene3D:3.30.200.20 | EntrezGene:839937 |
| ProteinID:AAD25744.1 | ProteinID:AEE31245.1 | ArrayExpress:AT1G30570 | EnsemblPlantsGene:AT1G30570 | RefSeq:AT1G30570 | TAIR:AT1G30570 |
| RefSeq:AT1G30570-TAIR-G | EnsemblPlants:AT1G30570.1 | TAIR:AT1G30570.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009653 |
| GO:GO:0009719 | GO:GO:0009741 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0040007 | Symbol:HERK2 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | InterPro:Malectin-like_Carb-bd_dom | RefSeq:NP_174345.1 |
| PFAM:PF07714 | PFAM:PF12819 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | ScanProsite:PS00107 |
| ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27003 | PANTHER:PTHR27003:SF135 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS |
| UniProt:Q9SA72 | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser-Thr/Tyr_kinase_cat_dom | InterPro:Ser/Thr_kinase_AS | SignalP:SignalP-TM |
| TMHMM:TMhelix | UniParc:UPI0000048303 | SEG:seg | : | : | : |
Description
HERK2Probable receptor-like protein kinase At1g30570 [Source:UniProtKB/Swiss-Prot;Acc:Q9SA72]
Coordinates
chr1:+:10828373..10831656
Molecular Weight (calculated)
93951.9 Da
IEP (calculated)
6.589
GRAVY (calculated)
-0.161
Length
849 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKLRKKYLE HLLCVLIFFT YVIGYGEAQS KSFLVDCGSN ATTEVDGRTW VGDLSPNKSV TLQGFDAITA STSKGSSVYA EIYKTARVFD AVLNYTFEGI
101: TQGNYFVRLH FSPFAIENHN VNESSFSVFA DGLRLMLDIN IAGEIAHKNL ILESTGHNAT ASSLVKEFLL PTGPGKLVLS FIPEKGSFGF VNAIEIVSVD
201: DKLFKESVTK VGGSEVELGL GGRGIETMYR LNVGGPKLGP SKDLKLYRTW ETDLSYMVIE NAGVEVKNSS NITYALADDS PVAPLLVYET ARMMSNTEVL
301: EKRFNISWKF EVDPNFDYLV RLHFCELLVD KQNQRIFRIY INNQTAAGNF DIFAHAGGKN KGIYQDYLDP VSSKNDVLWI QLGPDSSVGA SGDALLSGLE
401: IFKLSKNGNL AHLIRFDSTG HSVSDSKMRI IWISVGAGIA IIIFFVFLGI LVVCLCKKRR SKSDESKNNP PGWRPLFLHV NNSTANAKAT GGSLRLNTLA
501: ASTMGRKFTL AEIRAATKNF DDGLAIGVGG FGKVYRGELE DGTLIAIKRA TPHSQQGLAE FETEIVMLSR LRHRHLVSLI GFCDEHNEMI LVYEYMANGT
601: LRSHLFGSNL PPLSWKQRLE ACIGSARGLH YLHTGSERGI IHRDVKTTNI LLDENFVAKM SDFGLSKAGP SMDHTHVSTA VKGSFGYLDP EYFRRQQLTE
701: KSDVYSFGVV LFEAVCARAV INPTLPKDQI NLAEWALSWQ KQRNLESIID SNLRGNYSPE SLEKYGEIAE KCLADEGKNR PMMGEVLWSL EYVLQIHEAW
801: LRKQNGENSF SSSQAVEEAP ESFTLPACSN QDSSETEQSQ TGSALHNSA
101: TQGNYFVRLH FSPFAIENHN VNESSFSVFA DGLRLMLDIN IAGEIAHKNL ILESTGHNAT ASSLVKEFLL PTGPGKLVLS FIPEKGSFGF VNAIEIVSVD
201: DKLFKESVTK VGGSEVELGL GGRGIETMYR LNVGGPKLGP SKDLKLYRTW ETDLSYMVIE NAGVEVKNSS NITYALADDS PVAPLLVYET ARMMSNTEVL
301: EKRFNISWKF EVDPNFDYLV RLHFCELLVD KQNQRIFRIY INNQTAAGNF DIFAHAGGKN KGIYQDYLDP VSSKNDVLWI QLGPDSSVGA SGDALLSGLE
401: IFKLSKNGNL AHLIRFDSTG HSVSDSKMRI IWISVGAGIA IIIFFVFLGI LVVCLCKKRR SKSDESKNNP PGWRPLFLHV NNSTANAKAT GGSLRLNTLA
501: ASTMGRKFTL AEIRAATKNF DDGLAIGVGG FGKVYRGELE DGTLIAIKRA TPHSQQGLAE FETEIVMLSR LRHRHLVSLI GFCDEHNEMI LVYEYMANGT
601: LRSHLFGSNL PPLSWKQRLE ACIGSARGLH YLHTGSERGI IHRDVKTTNI LLDENFVAKM SDFGLSKAGP SMDHTHVSTA VKGSFGYLDP EYFRRQQLTE
701: KSDVYSFGVV LFEAVCARAV INPTLPKDQI NLAEWALSWQ KQRNLESIID SNLRGNYSPE SLEKYGEIAE KCLADEGKNR PMMGEVLWSL EYVLQIHEAW
801: LRKQNGENSF SSSQAVEEAP ESFTLPACSN QDSSETEQSQ TGSALHNSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.