Factsheet for GSMUA_AchrUn_randomP08480_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1
plastid 5
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	unclear	42.62	36.11
TraesCS5A01G420900.1	Wheat	vacuole	40.98	11.01
HORVU1Hr1G017870.1	Barley	extracellular, vacuole	8.2	6.67
Solyc01g097530.1.1	Tomato	plasma membrane	6.56	3.74
PGSC0003DMT400004989	Potato	extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP08480_001	EnsemblPlants:GSMUA_AchrUn_randomT08480_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG08480_001	GO:GO:0003674	GO:GO:0003824	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0009772	GO:GO:0009987	GO:GO:0015979	GO:GO:0019684
GO:GO:0045156	InterPro:IPR036854	InterPro:Photo_II_D1/D2_sf	InterPro:Photo_RC_L/M	PANTHER:PTHR33149	PANTHER:PTHR33149:SF11
SUPFAM:SSF81483	UniParc:UPI000295CB59	UniProt:M0U7F8	MapMan:35.2	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08480_001]

Coordinates

chrchrUn_random:-:37582366..37582631

Molecular Weight (calculated)

6994.3 Da

IEP (calculated)

9.830

GRAVY (calculated)

0.033

Length

61 amino acids

Sequence
(BLAST)

1: MVPWSTLSIV AAHGYLSRLI FQYASFNNSR SLHFFLAAWP GLQHLSTERT SYADSLTRFT Q

Best Arabidopsis Sequence Match ( ATCG00020.1 )
(BLAST)

001: MTAILERRES ESLWGRFCNW ITSTENRLYI GWFGVLMIPT LLTATSVFII AFIAAPPVDI DGIREPVSGS LLYGNNIISG AIIPTSAAIG LHFYPIWEAA
101: SVDEWLYNGG PYELIVLHFL LGVACYMGRE WELSFRLGMR PWIAVAYSAP VAAATAVFLI YPIGQGSFSD GMPLGISGTF NFMIVFQAEH NILMHPFHML
201: GVAGVFGGSL FSAMHGSLVT SSLIRETTEN ESANEGYRFG QEEETYNIVA AHGYFGRLIF QYASFNNSRS LHFFLAAWPV VGIWFTALGI STMAFNLNGF
301: NFNQSVVDSQ GRVINTWADI INRANLGMEV MHERNAHNFP LDLAAVEAPS TNG

Arabidopsis Description

PSBAPhotosystem II protein D1 [Source:UniProtKB/Swiss-Prot;Acc:P83755]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.