Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G017870.1 | Barley | extracellular, vacuole | 29.52 | 89.33 |
| Solyc02g021290.1.1 | Tomato | cytosol, nucleus | 16.74 | 74.51 |
| TraesCS4A01G153400.1 | Wheat | extracellular, mitochondrion, plasma membrane, vacuole | 84.58 | 52.6 |
| TraesCS5A01G103300.1 | Wheat | extracellular | 25.55 | 42.34 |
| GSMUA_AchrUn_... | Banana | mitochondrion, plastid | 11.01 | 40.98 |
| GSMUA_Achr10P... | Banana | unclear | 11.45 | 36.11 |
| PGSC0003DMT400004989 | Potato | extracellular | 4.85 | 11.22 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G420900.1 | EnsemblPlantsGene:TraesCS5A01G420900 | Gene3D:1.20.85.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006091 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009772 | GO:GO:0009987 | GO:GO:0015979 | GO:GO:0019684 |
| GO:GO:0045156 | InterPro:IPR036854 | InterPro:Photo_II_D1/D2_sf | InterPro:Photo_RC_L/M | PANTHER:PTHR33149 | PANTHER:PTHR33149:SF11 |
| PFAM:PF00124 | SUPFAM:SSF81483 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5A:+:607271908..607272860
Molecular Weight (calculated)
24466.1 Da
IEP (calculated)
5.114
GRAVY (calculated)
0.296
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPTLLTATS VFIIAFVAVP PVGIDGIREP VSGSLLYGNN IISTPVAAAT IVFLIYPIGH GSFSDGMPLG ISGRVQHHYA SFHMLGVAGL FGSSLFSAMH
101: GSLVTSSLIR ETAENESANE GYKSGQEEET YNIMAAHGFN NSHSLHFFLA AWPVVAIWFT TLGISTMDFN LNGFNFNQSV VDSQGRVINT WADIINRANL
201: GMEVMHEHNA HNFPLDLAAV EVPSINE
101: GSLVTSSLIR ETAENESANE GYKSGQEEET YNIMAAHGFN NSHSLHFFLA AWPVVAIWFT TLGISTMDFN LNGFNFNQSV VDSQGRVINT WADIINRANL
201: GMEVMHEHNA HNFPLDLAAV EVPSINE
1: MFLFYYLHHH SSSLTKWADE ERYQTSMFQW LHGLLITSSS LSWIKLKERR KTGVKHLCMT HYNML
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - /.../her Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT2G32487]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.