Factsheet for HORVU1Hr1G080540.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G373200.1	Wheat	cytosol	87.07	51.0
HORVU2Hr1G006460.1	Barley	mitochondrion	19.01	47.62
HORVU5Hr1G118600.1	Barley	mitochondrion	76.05	43.38
KXG24241	Sorghum	cytosol	62.74	35.64
HORVU1Hr1G072050.3	Barley	cytosol	60.84	34.04
EES13245	Sorghum	cytosol	60.84	33.83
Zm00001d035064_P001	Maize	cytosol	61.22	33.06
HORVU7Hr1G076490.1	Barley	cytosol	57.41	32.06
HORVU2Hr1G006540.2	Barley	mitochondrion	58.17	31.88
HORVU2Hr1G005310.2	Barley	cytosol	54.37	31.15
HORVU2Hr1G005350.1	Barley	cytosol	54.75	31.03
HORVU2Hr1G005330.5	Barley	cytosol	54.75	31.03
HORVU2Hr1G012940.1	Barley	cytosol	20.91	28.21
Zm00001d035057_P001	Maize	extracellular	61.98	22.0
HORVU7Hr1G000970.1	Barley	plastid	37.64	19.96
HORVU3Hr1G023780.1	Barley	plastid	35.74	19.34
HORVU1Hr1G075900.1	Barley	cytosol	30.8	18.04
HORVU3Hr1G085100.2	Barley	plastid	34.98	17.23
HORVU1Hr1G073330.1	Barley	cytosol	36.12	17.06

Protein Annotations

EnsemblPlants:HORVU1Hr1G080540.1	EnsemblPlantsGene:HORVU1Hr1G080540	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF9
PFAM:PF02458	SEG:seg	UniParc:UPI000B480854	UniProt:A0A287GG03	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:525611999..525613437

Molecular Weight (calculated)

27932.7 Da

IEP (calculated)

8.471

GRAVY (calculated)

0.111

Length

263 amino acids

Sequence
(BLAST)

001: MVPSPLPVFD KWFLDGCTVP IPLPFGKLED VVGQRLDLFP PVQECFLHFS AATLKKLKAK ANAEISGTTI ATISSLQALL AHLWRAVCRA RRLAPDKGTA
101: YIVYVGCRGR VGSIPASYAG NALAHVTAKS SAGEILGNGL GWVAWQLNQA VASFDEARAR DKLASWPQEP SFTRLPELVA SAPTMLLTGS SPRLDVYGND
201: FGWGAPLAVR SGAGNKMDGK ATVYEGRGRG GSMALEVCLA PEALARLVAD EEFMAAVGVP STY

Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)

001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC

Arabidopsis Description

AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.