Factsheet for HORVU3Hr1G085100.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G367900.1	Wheat	plastid	88.95	96.35
TraesCS3D01G360900.1	Wheat	plastid	88.58	95.94
TraesCS3B01G399600.1	Wheat	plastid	88.39	95.94
Os01t0854000-01	Rice	plastid	75.84	83.85
EES01771	Sorghum	plastid	76.78	82.83
Zm00001d042826_P001	Maize	plastid	74.34	82.02
Zm00001d012333_P001	Maize	plastid	75.09	78.63
GSMUA_Achr10P...	Banana	plastid	49.63	63.25
HORVU1Hr1G073330.1	Barley	cytosol	65.92	63.2
GSMUA_Achr8P19570_001	Banana	plastid	49.25	62.32
GSMUA_AchrUn_...	Banana	plastid	44.57	57.35
CDY07045	Canola	peroxisome	47.38	56.22
CDX74815	Canola	cytosol, plastid	45.69	56.22
CDX93218	Canola	peroxisome	47.0	55.65
KRH73150	Soybean	cytosol, plastid	48.88	54.6
Bra017041.1-P	Field mustard	cytosol	47.75	54.26
CDY40314	Canola	cytosol	46.25	54.17
Bra009632.1-P	Field mustard	plastid	41.95	54.11
AT5G01210.1	Thale cress	cytosol	47.75	53.68
CDY24938	Canola	cytosol, plastid	46.07	53.59
KRH14988	Soybean	cytosol, plastid	47.75	53.24
PGSC0003DMT400069755	Potato	cytosol, plastid	46.07	53.13
PGSC0003DMT400069897	Potato	plastid	45.69	53.04
Solyc05g052680.1.1	Tomato	cytosol, plastid	45.32	52.95
PGSC0003DMT400069898	Potato	cytosol	45.32	52.95
Bra004996.1-P	Field mustard	cytosol	47.38	52.82
KRH66032	Soybean	cytosol	46.07	52.68
AT2G39980.1	Thale cress	cytosol, plastid	47.19	52.28
Bra028893.1-P	Field mustard	cytosol, plastid	46.82	52.19
Solyc05g052670.1.1	Tomato	plastid	44.94	52.06
PGSC0003DMT400052409	Potato	cytosol, plastid	44.76	51.96
KRH75833	Soybean	cytosol	45.88	51.69
Solyc09g014280.1.1	Tomato	cytosol, plastid	44.38	51.52
VIT_08s0007g01930.t01	Wine grape	plastid	46.63	50.4
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	45.88	50.31
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	46.44	49.11
KRG97771	Soybean	plastid	43.26	48.84
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	46.44	48.82
KRH31113	Soybean	plastid	43.45	47.06
HORVU2Hr1G006460.1	Barley	mitochondrion	7.68	39.05
HORVU7Hr1G000970.1	Barley	plastid	33.52	36.09
HORVU1Hr1G080540.1	Barley	cytosol	17.23	34.98
HORVU1Hr1G072050.3	Barley	cytosol	30.71	34.89
HORVU3Hr1G023780.1	Barley	plastid	31.27	34.36
HORVU5Hr1G118600.1	Barley	mitochondrion	29.4	34.06
HORVU7Hr1G076490.1	Barley	cytosol	29.4	33.33
HORVU2Hr1G005350.1	Barley	cytosol	28.65	32.97
HORVU2Hr1G005330.5	Barley	cytosol	28.65	32.97
HORVU1Hr1G075900.1	Barley	cytosol	26.78	31.85
HORVU2Hr1G005310.2	Barley	cytosol	26.59	30.94
HORVU2Hr1G006540.2	Barley	mitochondrion	27.72	30.83
HORVU2Hr1G012940.1	Barley	cytosol	11.24	30.77

Protein Annotations

EnsemblPlants:HORVU3Hr1G085100.2	EnsemblPlantsGene:HORVU3Hr1G085100	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	ncoils:Coil	PANTHER:PTHR31896
PANTHER:PTHR31896:SF23	PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	UniParc:UPI000B473123	UniProt:A0A287M173
MapMan:50.2.3	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:610947834..610949907

Molecular Weight (calculated)

57475.0 Da

IEP (calculated)

8.329

GRAVY (calculated)

0.019

Length

534 amino acids

Sequence
(BLAST)

001: TPLVSYINRP SLLTVQHKAA LPKPPPWPLL RNAPLATDQL APMAQMLSAM TMMDTVPTAP AIMPNQAICL DAPMSGSGIT VVSRQAVLPD GPPSAIGDLT
101: LSVSDLPMLS CHYIQKGLFF PAPDVPMASL VSLLVSSLSR ALAIFPALAG RFVTLPDDRI VIRCNDAGVD FHHAVAPALS LNDFLLPNAD VPTRLTKDLF
201: PMDRTVSYEG HRRPLTSFQL TVLGDGAVFI GVVANHAVVD GTSFWHFYNT WAALCRGASP KLPDFRRNFF GESTAVLRFA GGVGPAVTFD ADAPLRERIF
301: HFSRDAIREL KAIANRRSSA GQDAEVYGKM AHDPKNQEAR TEISSFQSLC AQIWISTTRA RKQLDADATT TLRLAVNCRH RLRPAVSPAY FGNAIQSAPT
401: TATVAELASN DLRWAASRLN ASLAAYGDEA IRGAAAAWQA APRCFPLGNP DGAVVTMGSS NRFPMYEGND FGWGRPLAVR SGRANKFDGK MSAFPGRSGD
501: GSVDIEVCLA PDTMAALLRD DGFMRYVSCP AHLL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.