Factsheet for TraesCS3B01G399600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G360900.1	Wheat	plastid	96.95	96.75
TraesCS3A01G367900.1	Wheat	plastid	96.54	96.35
HORVU3Hr1G085100.2	Barley	plastid	95.94	88.39
Os01t0854000-01	Rice	plastid	82.32	83.85
EES01771	Sorghum	plastid	82.72	82.22
Zm00001d042826_P001	Maize	plastid	79.88	81.2
Zm00001d012333_P001	Maize	plastid	80.89	78.04
TraesCS1B01G287800.1	Wheat	cytosol, plastid	68.9	64.33
GSMUA_Achr10P...	Banana	plastid	54.06	63.48
GSMUA_Achr8P19570_001	Banana	plastid	54.27	63.27
GSMUA_AchrUn_...	Banana	plastid	48.98	58.07
CDY07045	Canola	peroxisome	50.81	55.56
CDX74815	Canola	cytosol, plastid	48.78	55.3
CDX93218	Canola	peroxisome	50.41	54.99
KRH73150	Soybean	cytosol, plastid	52.64	54.18
Bra009632.1-P	Field mustard	plastid	45.53	54.11
CDY40314	Canola	cytosol	50.0	53.95
Bra017041.1-P	Field mustard	cytosol	51.22	53.62
AT5G01210.1	Thale cress	cytosol	51.63	53.47
Solyc05g052680.1.1	Tomato	cytosol, plastid	49.19	52.95
PGSC0003DMT400069898	Potato	cytosol	49.19	52.95
CDY24938	Canola	cytosol, plastid	49.39	52.94
KRH14988	Soybean	cytosol, plastid	51.42	52.82
PGSC0003DMT400069755	Potato	cytosol, plastid	49.59	52.7
Bra028893.1-P	Field mustard	cytosol, plastid	51.22	52.61
PGSC0003DMT400069897	Potato	plastid	49.19	52.61
KRH66032	Soybean	cytosol	49.8	52.46
Bra004996.1-P	Field mustard	cytosol	50.61	51.98
PGSC0003DMT400052409	Potato	cytosol, plastid	48.58	51.96
Solyc05g052670.1.1	Tomato	plastid	48.58	51.84
AT2G39980.1	Thale cress	cytosol, plastid	50.61	51.66
Solyc09g014280.1.1	Tomato	cytosol, plastid	48.17	51.52
KRH75833	Soybean	cytosol	49.59	51.48
VIT_08s0007g01930.t01	Wine grape	plastid	50.81	50.61
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	49.19	49.69
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	50.81	49.51
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	50.81	49.21
KRG97771	Soybean	plastid	46.34	48.2
KRH31113	Soybean	plastid	46.75	46.65
TraesCS7B01G414500.1	Wheat	cytosol	8.54	45.65
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	34.15	35.82
TraesCS1B01G295900.1	Wheat	cytosol	33.54	35.56
TraesCS2B01G490200.1	Wheat	mitochondrion	32.93	34.54
TraesCS1B01G373200.1	Wheat	cytosol	31.5	34.52
TraesCS7B01G221000.1	Wheat	cytosol	32.32	34.27
TraesCS2B01G055400.1	Wheat	cytosol	25.0	34.07
TraesCS1B01G295800.1	Wheat	cytosol	31.91	33.98
TraesCS5B01G519900.1	Wheat	cytosol, mitochondrion	31.91	33.98
TraesCS1B01G052500.1	Wheat	cytosol, plastid	31.5	33.19
TraesCS7B01G451000.1	Wheat	cytosol	30.08	32.82
TraesCS2B01G586200.1	Wheat	cytosol	29.88	32.31
TraesCS2B01G048600.1	Wheat	cytosol	29.88	32.31
TraesCS4B01G335900.1	Wheat	cytosol	30.69	32.2
TraesCS1B01G354000.1	Wheat	cytosol	29.07	32.06
TraesCS4B01G336000.1	Wheat	mitochondrion	29.88	31.82
TraesCS2B01G048900.1	Wheat	cytosol	29.27	30.44
TraesCS2B01G018300.1	Wheat	cytosol	26.63	29.84
TraesCS2B01G049100.1	Wheat	cytosol	29.47	28.6
TraesCS2B01G048800.1	Wheat	peroxisome	16.87	26.43

Protein Annotations

EnsemblPlants:TraesCS3B01G399600.1	EnsemblPlantsGene:TraesCS3B01G399600	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF23
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr3B:+:630868996..630870474

Molecular Weight (calculated)

52911.4 Da

IEP (calculated)

7.765

GRAVY (calculated)

0.042

Length

492 amino acids

Sequence
(BLAST)

001: MAQMLSAMTM MDTVPTAPAI LPTQAICLDA PVSGSGIAVL SRQAVRPDGP PSAIGDLTLS VSDLPMLSCH YIQKGLFFPA PDVPMASLVS LLVSSLSRAL
101: AVFPALAGRF VTLPDDRIVI RCNDAGVEFH HAVAPALSLN DFLVPNADVP TRLTKDLFPM DRTVSYEGHR RPLTSFQLTV LGDGAVFIGI VANHAVVDGT
201: SFWHFYNTWA TLCRGASPKL PDFRRNFFGE STAVLRFAGG VGPAVTFDAD APLRERIFHF SRDAIRELKA IANRRSSAGQ EAEVYGKMAH DPKNQEARSE
301: ISSFQSLCAQ IWISTTRARK QLDAGATATL RLAVNCRHRL RPAISPAYFG NAIQSAPTTA TVAELASNDL RWAASRLHAS LAAYGDEAIR GVAAAWQAAP
401: RCFPLGNPDG AVVTMGSSNR FPMYEGNDFG WGRPLAVRSG RANKFDGKMS AFPGRSGDGS VDIEVCLAPD TMAALLRDDE FMQYVSCPAH LL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.