Factsheet for Zm00001d012333_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042826_P001	Maize	plastid	83.73	88.22
Os01t0854000-01	Rice	plastid	80.2	84.68
TraesCS3A01G367900.1	Wheat	plastid	79.41	82.15
TraesCS3D01G360900.1	Wheat	plastid	79.02	81.74
TraesCS3B01G399600.1	Wheat	plastid	78.04	80.89
HORVU3Hr1G085100.2	Barley	plastid	78.63	75.09
Zm00001d010079_P001	Maize	plastid	67.06	68.67
GSMUA_Achr10P...	Banana	plastid	51.76	63.01
GSMUA_Achr8P19570_001	Banana	plastid	50.39	60.9
CDX74815	Canola	cytosol, plastid	47.84	56.22
CDY07045	Canola	peroxisome	49.22	55.78
GSMUA_AchrUn_...	Banana	plastid	45.1	55.42
CDX93218	Canola	peroxisome	48.82	55.21
CDY40314	Canola	cytosol	48.63	54.39
Solyc05g052680.1.1	Tomato	cytosol, plastid	48.63	54.27
PGSC0003DMT400069755	Potato	cytosol, plastid	49.22	54.21
KRH73150	Soybean	cytosol, plastid	50.78	54.18
Bra009632.1-P	Field mustard	plastid	43.92	54.11
Bra017041.1-P	Field mustard	cytosol	49.8	54.04
CDY24938	Canola	cytosol, plastid	48.63	54.03
PGSC0003DMT400069898	Potato	cytosol	48.24	53.83
KRH66032	Soybean	cytosol	49.22	53.75
PGSC0003DMT400069897	Potato	plastid	48.24	53.48
AT5G01210.1	Thale cress	cytosol	49.8	53.47
KRH14988	Soybean	cytosol, plastid	50.2	53.44
KRH75833	Soybean	cytosol	49.41	53.16
PGSC0003DMT400052409	Potato	cytosol, plastid	47.84	53.04
Bra004996.1-P	Field mustard	cytosol	49.8	53.03
Solyc05g052670.1.1	Tomato	plastid	47.84	52.93
AT2G39980.1	Thale cress	cytosol, plastid	50.0	52.9
Bra028893.1-P	Field mustard	cytosol, plastid	49.61	52.82
Solyc09g014280.1.1	Tomato	cytosol, plastid	47.06	52.17
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	49.22	51.54
VIT_08s0007g01930.t01	Wine grape	plastid	49.61	51.21
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	49.41	49.9
KRG97771	Soybean	plastid	46.08	49.68
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	49.41	49.61
KRH31113	Soybean	plastid	46.47	48.07
Zm00001d035064_P001	Maize	cytosol	36.08	37.78
Zm00001d035865_P001	Maize	mitochondrion	35.1	37.68
Zm00001d049704_P001	Maize	cytosol, mitochondrion, peroxisome	34.71	36.88
Zm00001d031893_P001	Maize	mitochondrion	30.2	34.68
Zm00001d035057_P001	Maize	extracellular	36.27	24.97

Protein Annotations

EnsemblPlants:Zm00001d012333_P001	EnsemblPlants:Zm00001d012333_T001	EnsemblPlantsGene:Zm00001d012333	EntrezGene:103636474	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF23	PFAM:PF02458	ProteinID:AQK99353.1	SEG:seg	SUPFAM:SSF52777
UniParc:UPI000220BA90	UniProt:K7W347	MapMan:50.2.3	:	:	:

Description

HXXXD-type acyl-transferase family protein

Coordinates

chr8:-:172624862..172626394

Molecular Weight (calculated)

54388.3 Da

IEP (calculated)

8.159

GRAVY (calculated)

0.047

Length

510 amino acids

Sequence
(BLAST)

001: MAQMISTMPM LDAAPAAAST IMPRLQAAAA AAACLDAPPS GIAVVSRQHV RPDAASAPAV GDLALSVSDL PMLSCHYIQK GLFFPAPDLP MPSLVLLLRS
101: SLSRALAAVP PLAGRLVTLP DDDGRVVVRC NDGAGVDFLH AVAPGLSLDD FLVPGADVPT KLTKDLFPMD MDRTVSYEGH RRPLASFQVT VLGDGAVFIG
201: IVANHAVVDG TSFWHFFNTW AAICRGDSPT RLPDFSRNFF GESTAVLRFP GGVGPSVTFD VDAPLRERVF RFSADAVRQL KAVANRRPSR GQDAEVYGKM
301: AQDPKNDPLV RGRGGEEISS FQSLCAQIWL AVTRARKRLD PDATTTFRMA VNCRHRLRPA VSPAYFGNAI QSAVTTATVT ELLACSDLRW AAGKLNASLA
401: AYGDGAIRRA AAAWQAAPRC FPLGNPDGAV ITMGSSNRFP MYEGNDFGWG RPLAVRSGRA NKFDGKMSAF PGRAGDGSVD IEVCLTPDTM AALLRDTEFM
501: QFVSGPSHLL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.