CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31113	Soybean	plastid	90.27	86.61
KRH14988	Soybean	cytosol, plastid	63.64	62.84
KRH73150	Soybean	cytosol, plastid	63.21	62.55
CDX74815	Canola	cytosol, plastid	54.33	59.22
CDY07045	Canola	peroxisome	54.33	57.11
CDX93218	Canola	peroxisome	53.7	56.32
AT2G39980.1	Thale cress	cytosol, plastid	57.29	56.22
CDY24938	Canola	cytosol, plastid	54.12	55.77
Bra004996.1-P	Field mustard	cytosol	56.24	55.53
Bra017041.1-P	Field mustard	cytosol	54.97	55.32
KRH66032	Soybean	cytosol	53.49	54.18
KRH75833	Soybean	cytosol	53.7	53.59
GSMUA_Achr10P...	Banana	plastid	45.88	51.79
GSMUA_Achr8P19570_001	Banana	plastid	46.09	51.66
Os01t0854000-01	Rice	plastid	50.32	49.28
Zm00001d042826_P001	Maize	plastid	49.68	48.55
GSMUA_AchrUn_...	Banana	plastid	42.07	47.95
Os05t0449200-01	Rice	plastid	48.63	47.92
EES01771	Sorghum	plastid	49.68	47.47
Zm00001d010079_P001	Maize	plastid	49.89	47.39
TraesCS3D01G360900.1	Wheat	plastid	48.63	46.65
TraesCS3A01G367900.1	Wheat	plastid	48.41	46.45
EES19625	Sorghum	plastid	50.53	46.41
TraesCS3B01G399600.1	Wheat	plastid	48.2	46.34
Zm00001d012333_P001	Maize	plastid	49.68	46.08
HORVU3Hr1G085100.2	Barley	plastid	48.84	43.26
TraesCS1B01G287800.1	Wheat	cytosol, plastid	47.78	42.88
TraesCS1A01G278800.1	Wheat	cytosol, plastid	47.78	42.8
HORVU1Hr1G073330.1	Barley	cytosol	48.2	40.93
TraesCS1D01G278100.1	Wheat	plastid	47.99	39.75
KRH61316	Soybean	cytosol	38.48	39.48
KRH52020	Soybean	cytosol	38.05	39.47
KRH40990	Soybean	extracellular	25.37	39.34
KRH61321	Soybean	cytosol	37.42	38.48
KRH61317	Soybean	vacuole	32.77	38.27
KRH52019	Soybean	cytosol	36.58	37.86
KRH61619	Soybean	cytosol	36.79	37.83
KRH40991	Soybean	cytosol	32.35	37.23
KRH61319	Soybean	cytosol, mitochondrion, nucleus	36.58	36.89
KRH61320	Soybean	cytosol, plastid	36.36	35.39
KRH61322	Soybean	cytosol	22.62	34.41
KRH04296	Soybean	cytosol	31.92	34.09
KRH57913	Soybean	cytosol	31.29	33.95
KRH04581	Soybean	cytosol, endoplasmic reticulum	31.5	33.94
KRH08886	Soybean	cytosol, nucleus	30.02	31.63
KRH38407	Soybean	cytosol	29.81	31.47

Protein Annotations

EMBL:ACUP02010815	EnsemblPlants:KRG97771	EnsemblPlantsGene:GLYMA_18G029900	EntrezGene:100792476	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF11	PFAM:PF02458	ProteinID:KRG97771	ProteinID:KRG97771.1	SEG:seg
SUPFAM:SSF52777	UniParc:UPI00029651F9	UniProt:I1MZ48	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr18:-:2270075..2271915

Molecular Weight (calculated)

51704.4 Da

IEP (calculated)

6.661

GRAVY (calculated)

-0.132

Length

473 amino acids

Sequence
(BLAST)

001: MLCAKMSYSS SAFPSVVSKC TVVPHRNSTM GDLKLSISDL NMLLSHYIQK GCLFTTPSLP SSALIPHLKN ALSQTLSLFP PLAGRLKTDA DGYVYITCND
101: TGVDFIHVTA ADISVADLLS PSSSSSSSDV PPIFKQLFPF HHKISYTAHS SPIMAFQVTD LADGIFLGCA VCHAVTDGAS FWNFFNTFAG ISRGATTSPS
201: TLPDFRRESI LNSNVVLRLP EEIKVTFNVE EPFRERIFSF SRESIQELKA TVNNNGLTSF PPPENGDAVE LMAKMSNDTQ PKTVTTTEIS SFQSLCALVW
301: RCVTKARNIE GSKTTTFRMA VNVRQRLEPK LGDCYFGNAI QSIATCAEAA DVASKELRWC AEQLNKSVKA FDSATVHRNV ENWERQPKCF ELGNHDGATV
401: QMGSSPRFPM YDNDFGWGRP LAVRSGGANK FDGKMSAFPG RNGGGAVDLE MVLAPDTMAR LESDSEFMFY VSG

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.