CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042826_P001	Maize	plastid	93.13	95.25
Os01t0854000-01	Rice	plastid	84.44	86.54
TraesCS3D01G360900.1	Wheat	plastid	82.83	83.16
TraesCS3A01G367900.1	Wheat	plastid	82.83	83.16
TraesCS3B01G399600.1	Wheat	plastid	82.22	82.72
HORVU3Hr1G085100.2	Barley	plastid	82.83	76.78
EES19625	Sorghum	plastid	70.51	67.77
GSMUA_Achr10P...	Banana	plastid	53.74	63.48
GSMUA_Achr8P19570_001	Banana	plastid	52.93	62.09
GSMUA_AchrUn_...	Banana	plastid	48.28	57.59
CDX74815	Canola	cytosol, plastid	49.9	56.91
CDY07045	Canola	peroxisome	51.11	56.22
CDX93218	Canola	peroxisome	50.71	55.65
KRH73150	Soybean	cytosol, plastid	52.93	54.81
AT5G01210.1	Thale cress	cytosol	52.32	54.53
Solyc05g052680.1.1	Tomato	cytosol, plastid	50.3	54.49
CDY24938	Canola	cytosol, plastid	50.51	54.47
PGSC0003DMT400069755	Potato	cytosol, plastid	50.91	54.43
CDY40314	Canola	cytosol	50.1	54.39
PGSC0003DMT400069898	Potato	cytosol	50.1	54.27
Bra017041.1-P	Field mustard	cytosol	51.52	54.26
PGSC0003DMT400069897	Potato	plastid	50.3	54.13
Bra009632.1-P	Field mustard	plastid	45.25	54.11
KRH66032	Soybean	cytosol	50.91	53.96
KRH14988	Soybean	cytosol, plastid	52.12	53.86
Bra028893.1-P	Field mustard	cytosol, plastid	51.92	53.65
Bra004996.1-P	Field mustard	cytosol	51.92	53.65
Solyc05g052670.1.1	Tomato	plastid	49.9	53.58
KRH75833	Soybean	cytosol	51.11	53.38
PGSC0003DMT400052409	Potato	cytosol, plastid	49.49	53.26
AT2G39980.1	Thale cress	cytosol, plastid	51.72	53.11
Solyc09g014280.1.1	Tomato	cytosol, plastid	49.09	52.83
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	50.71	51.54
VIT_08s0007g01930.t01	Wine grape	plastid	51.31	51.42
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	51.92	50.89
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	51.72	50.39
KRG97771	Soybean	plastid	47.47	49.68
KRH31113	Soybean	plastid	47.88	48.07
EER87685	Sorghum	mitochondrion	36.77	39.48
OQU91799	Sorghum	mitochondrion	37.37	39.28
KXG24241	Sorghum	cytosol	34.34	36.72
EER87684	Sorghum	plastid	36.57	36.71
EES13245	Sorghum	cytosol	33.74	35.31
KXG24238	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	31.92	32.58
EES14067	Sorghum	cytosol, peroxisome, plastid	30.51	32.33

Protein Annotations

EnsemblPlants:EES01771	EnsemblPlantsGene:SORBI_3003G360000	EntrezGene:8060110	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF23	PFAM:PF02458	ProteinID:EES01771	ProteinID:EES01771.1	RefSeq:XP_002456651.1	SEG:seg
SUPFAM:SSF52777	unigene:Sbi.2282	UniParc:UPI0001A84680	UniProt:C5XPW4	MapMan:50.2.3	:

Description

hypothetical protein

Coordinates

chr3:+:67762163..67764218

Molecular Weight (calculated)

53232.1 Da

IEP (calculated)

7.968

GRAVY (calculated)

0.065

Length

495 amino acids

Sequence
(BLAST)

001: MAQMISTMPM LDAAPAASAI MAPKLQAAAA ACLDAPPSGI TVVSRQHVRP DAASAIGDLT LSVSDLPMLS CHYIQKGLFF PAPDLPMPSL VSLLLSSLSR
101: ALAVVPALAG RLVTLPDDRI VIRCNDAGVD FLHAVAPGLS LDDFLVPDAD VPTKLTKDLF PMDRTVSYEG HRRPLTSFQV TVLGDGAVFI GIVANHAVVD
201: GTSFWQFFNT WAAICRGESP KMPDFRRNFF GESTAVLRFP GGVGPSVTFD VDAPLRERVF HFSADAIREL KTIANRRPSG GQDAEVYGKM AHDPKNPQVL
301: RGEISSFQSL CAQIWLAVTR ARKRLAPDAT TTFRMAVNCR HRLQPAISPV YFGNAIQSAV TLATVSELAR SDLRWAAGKL NESLAAYGDG TIRRAAAAWQ
401: AAPRCFPLGN PDGAVITMGS SNRFPMYEGN DFGWGRPLAV RSGRANKFDG KMSAFPGRAG DGSVDIEVCL PPETMAALLR DAEFMQYVSC PSHLL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.