CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004996.1-P	Field mustard	cytosol	99.08	89.77
CDY24938	Canola	cytosol, plastid	88.48	83.66
CDY07045	Canola	peroxisome	85.71	82.67
CDX93218	Canola	peroxisome	85.25	82.04
AT2G39980.1	Thale cress	cytosol, plastid	87.33	78.63
PGSC0003DMT400069898	Potato	cytosol	67.51	64.11
PGSC0003DMT400069897	Potato	plastid	67.51	63.7
Solyc05g052680.1.1	Tomato	cytosol, plastid	67.05	63.68
Solyc05g052670.1.1	Tomato	plastid	67.51	63.56
PGSC0003DMT400069755	Potato	cytosol, plastid	67.74	63.5
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	68.89	61.4
CDY40314	Canola	cytosol	63.13	60.09
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	65.44	55.91
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	64.98	55.84
KRG97771	Soybean	plastid	59.22	54.33
GSMUA_Achr10P...	Banana	plastid	52.3	54.18
KRH31113	Soybean	plastid	60.37	53.14
GSMUA_Achr8P19570_001	Banana	plastid	50.23	51.66
GSMUA_AchrUn_...	Banana	plastid	48.62	50.84
Os01t0854000-01	Rice	plastid	56.22	50.52
Zm00001d042826_P001	Maize	plastid	55.99	50.21
EES01771	Sorghum	plastid	56.91	49.9
Os05t0449200-01	Rice	plastid	55.07	49.79
TraesCS3A01G367900.1	Wheat	plastid	55.99	49.29
TraesCS3D01G360900.1	Wheat	plastid	55.76	49.09
TraesCS3B01G399600.1	Wheat	plastid	55.3	48.78
Zm00001d010079_P001	Maize	plastid	55.53	48.39
Zm00001d012333_P001	Maize	plastid	56.22	47.84
EES19625	Sorghum	plastid	55.76	46.99
HORVU3Hr1G085100.2	Barley	plastid	56.22	45.69
CDY17759	Canola	cytosol	8.29	45.0
TraesCS1A01G278800.1	Wheat	cytosol, plastid	54.15	44.51
TraesCS1B01G287800.1	Wheat	cytosol, plastid	53.69	44.21
CDY14025	Canola	extracellular	15.21	43.42
HORVU1Hr1G073330.1	Barley	cytosol	53.46	41.65
TraesCS1D01G278100.1	Wheat	plastid	53.69	40.81
CDY40772	Canola	cytosol, nucleus, plastid	38.48	40.44
CDY14027	Canola	cytosol, nucleus, plastid	37.79	39.9
CDX71519	Canola	cytosol, nucleus, plastid	40.55	39.2
CDY21238	Canola	cytosol	40.09	38.75
CDY02424	Canola	cytosol	40.09	38.75
CDX81073	Canola	cytosol	39.17	36.88
CDX78313	Canola	cytosol	39.86	36.73
CDX81074	Canola	plastid	38.71	36.52
CDY40771	Canola	cytosol	38.02	34.02
CDX97348	Canola	cytosol	18.43	33.61
CDY61372	Canola	cytosol	18.2	32.64
CDY18724	Canola	cytosol	31.11	31.62
CDX83118	Canola	mitochondrion, plastid	32.49	31.4
CDX77413	Canola	cytosol, plastid	23.04	31.25
CDY14026	Canola	cytosol	18.43	31.25
CDY01434	Canola	cytosol	31.8	31.01
CDY07540	Canola	cytosol	31.57	30.72
CDY39539	Canola	cytosol, plastid	31.8	30.53
CDY47247	Canola	plasma membrane	25.58	30.08
CDY40431	Canola	cytosol	30.88	29.78
CDX74510	Canola	cytosol	30.65	29.69
CDY04024	Canola	cytosol	10.83	29.56
CDY30596	Canola	extracellular	18.2	29.48
CDY01691	Canola	plastid	29.49	29.29
CDX68582	Canola	mitochondrion	9.91	29.25
CDY12811	Canola	extracellular	31.57	28.96
CDY18638	Canola	cytosol	29.95	28.76
CDX74540	Canola	cytosol	26.73	28.64
CDX80398	Canola	cytosol	30.18	28.23
CDY32573	Canola	cytosol	24.19	28.23
CDX83119	Canola	cytosol	11.75	28.18
CDY47454	Canola	cytosol	29.72	28.17
CDX81339	Canola	cytosol	29.03	27.88
CDY44265	Canola	cytosol	29.95	27.66
CDX88059	Canola	cytosol	29.95	27.66
CDY12812	Canola	cytosol	18.2	27.34
CDY01433	Canola	cytosol	27.42	27.23
CDY66079	Canola	cytosol	6.91	16.48

Protein Annotations

EnsemblPlants:CDX74815	EnsemblPlantsGene:GSBRNA2T00116789001	Gene3D:3.30.559.10	GO:A0A078CD83	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF11	PFAM:PF02458	ProteinID:CDX74815	ProteinID:CDX74815.1	SEG:seg	SUPFAM:SSF52777
UniParc:UPI0004EDEB80	MapMan:50.2.3	:	:	:	:

Description

BnaA05g05610D

Coordinates

chrLK031802:+:791487..792926

Molecular Weight (calculated)

47705.6 Da

IEP (calculated)

8.487

GRAVY (calculated)

-0.246

Length

434 amino acids

Sequence
(BLAST)

001: MPSLENSVTV ISRSRVFPDQ KSTLVHLKLS VSDLPMLSCH YIQKGCLFTR PHLPPHALLS HLKHALSLTL SHFPPLAGRL STSEDGHVFL SCNDAGADFV
101: SAAAKSFFTY DRTVSYDGHN RPILAVQVTE LNDGVFIGCS VNHSVTDGTS LWNFINTFAE VSRGAEGNVT RHPDFTRESV LISPAVLKVP QGGPKVTFNE
201: NEPLRERIFS FSREQILELK AMVNKKRSWT VGNGEINGVE VNDVVAVEIS SFQSLSALLW RAITRARKLP SSKTTTFRMA VNVRHRLSPK LDPEYFGNAI
301: QSVPTFATAG EVLSRDIRWS ADQLNRSVAA HQDGKIRDTV ADWEANPRCF PLGNPDGASV TMGSSPRFPM YDNDFGWGKP VAVRSGRANK FDGKISAFPG
401: RDGNGSVDLE VVLAPETMAG IESDGEFMRY VSKK

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.