CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	cytosol
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d010079_P001	Maize	plastid	88.93	91.97
Os05t0449200-01	Rice	plastid	76.7	82.29
TraesCS1A01G278800.1	Wheat	cytosol, plastid	75.73	73.86
TraesCS1B01G287800.1	Wheat	cytosol, plastid	75.15	73.43
EES01771	Sorghum	plastid	67.77	70.51
TraesCS1D01G278100.1	Wheat	plastid	76.12	68.65
HORVU1Hr1G073330.1	Barley	cytosol	73.98	68.4
GSMUA_Achr10P...	Banana	plastid	50.68	62.29
GSMUA_Achr8P19570_001	Banana	plastid	49.9	60.9
GSMUA_AchrUn_...	Banana	plastid	45.44	56.39
CDX74815	Canola	cytosol, plastid	46.99	55.76
Bra009632.1-P	Field mustard	plastid	44.27	55.07
CDY40314	Canola	cytosol	48.74	55.04
Solyc05g052680.1.1	Tomato	cytosol, plastid	47.96	54.05
CDY07045	Canola	peroxisome	47.18	54.0
KRH73150	Soybean	cytosol, plastid	50.1	53.97
KRH14988	Soybean	cytosol, plastid	50.1	53.86
PGSC0003DMT400069898	Potato	cytosol	47.77	53.83
KRH66032	Soybean	cytosol	48.74	53.75
AT5G01210.1	Thale cress	cytosol	49.32	53.47
CDX93218	Canola	peroxisome	46.8	53.44
Bra028893.1-P	Field mustard	cytosol, plastid	49.51	53.24
PGSC0003DMT400069897	Potato	plastid	47.38	53.04
Solyc05g052670.1.1	Tomato	plastid	47.18	52.71
PGSC0003DMT400069755	Potato	cytosol, plastid	47.38	52.7
Solyc09g014280.1.1	Tomato	cytosol, plastid	46.99	52.61
KRH75833	Soybean	cytosol	48.35	52.53
CDY24938	Canola	cytosol, plastid	46.8	52.51
Bra004996.1-P	Field mustard	cytosol	48.74	52.4
PGSC0003DMT400052409	Potato	cytosol, plastid	46.8	52.39
Bra017041.1-P	Field mustard	cytosol	47.77	52.34
AT2G39980.1	Thale cress	cytosol, plastid	48.16	51.45
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	48.16	50.92
VIT_08s0007g01930.t01	Wine grape	plastid	48.74	50.81
KRG97771	Soybean	plastid	46.41	50.53
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	49.32	50.3
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	48.93	49.61
KRH31113	Soybean	plastid	46.41	48.48
EER87685	Sorghum	mitochondrion	35.92	40.13
OQU91799	Sorghum	mitochondrion	35.92	39.28
EER87684	Sorghum	plastid	35.73	37.32
EES13245	Sorghum	cytosol	33.59	36.58
KXG24241	Sorghum	cytosol	32.23	35.85
EES14067	Sorghum	cytosol, peroxisome, plastid	31.07	34.26
KXG24238	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	31.46	33.4

Protein Annotations

EnsemblPlants:EES19625	EnsemblPlantsGene:SORBI_3009G157100	EntrezGene:8072515	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF5	PFAM:PF02458	ProteinID:EES19625	ProteinID:EES19625.1	RefSeq:XP_002441195.1	SEG:seg
SUPFAM:SSF52777	unigene:Sbi.12344	UniParc:UPI0001A89504	UniProt:C5YYV1	MapMan:50.2.3	:

Description

hypothetical protein

Coordinates

chr9:-:51464198..51466644

Molecular Weight (calculated)

54043.2 Da

IEP (calculated)

7.216

GRAVY (calculated)

0.077

Length

515 amino acids

Sequence
(BLAST)

001: MAPPISADAL VVEAASAIAA SPAIAPNGMV SRKDVAAAAA PAISVVSKQT VRPAAGASAP VVGGDLRLSV SDMPMLSCHY IQKGLFFPPP PPSVLTTTAS
101: LVSSLVTALS RALGVFPALA GRLVTLHDDS IVIRCGGGGD DADAAVEFYH AVAPSLSLGD FLVPGADVPT SLTNALFPMD RTVSYGGHAR PLSSFQLTEL
201: GDGAVFVGFV ANHAVVDGTS FWHFFNTWAG LCRGGGAPIR EPDFRRNFFG ESTAVLRFPG GVGPAVTFDS EAPLRERILH FSAAAIRELK ATANHSKRTG
301: HQDAEANGKL AHDDSKLLHG RCSGEISSFQ SLCAHIWRAV TRARRLLAAD KTTTFRMAVN CRHRLRPAIS PLYFGNAIQS VATTATVAEL ASNDLGWAAA
401: RLHATVTSHE DGAIRRAAAE WEAAPRCFPL GNPDGAALTM GSSPRFPMYD GNDFGWGRAL AVRSGRANKF DGKMSAFPGQ AGDGSVDVEV CLAPDTMARL
501: LLDEEFLQYV SSPAP

Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)

001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC

Arabidopsis Description

AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.