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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
  • plastid 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400052409 Potato cytosol, plastid 95.87 95.87
KRH66032 Soybean cytosol 65.43 64.45
VIT_08s0007g01930.t01 Wine grape plastid 69.13 64.37
CDY40314 Canola cytosol 63.26 63.82
Bra009632.1-P Field mustard plastid 57.17 63.53
KRH75833 Soybean cytosol 65.43 63.5
AT5G01210.1 Thale cress cytosol 64.78 62.74
Solyc05g052680.1.1 Tomato cytosol, plastid 61.74 62.14
Bra028893.1-P Field mustard cytosol, plastid 64.13 61.59
Solyc05g052670.1.1 Tomato plastid 60.65 60.52
CDY48117 Canola endoplasmic reticulum, nucleus, peroxisome 64.13 58.42
CDY55902 Canola endoplasmic reticulum, nucleus, peroxisome 63.48 57.48
GSMUA_Achr10P... Banana plastid 48.04 52.74
GSMUA_Achr8P19570_001 Banana plastid 46.96 51.18
GSMUA_AchrUn_... Banana plastid 44.78 49.64
Zm00001d042826_P001 Maize plastid 52.17 49.59
Os05t0449200-01 Rice plastid 51.52 49.38
EES01771 Sorghum plastid 52.83 49.09
Os01t0854000-01 Rice plastid 51.52 49.07
TraesCS3A01G367900.1 Wheat plastid 51.96 48.48
TraesCS3D01G360900.1 Wheat plastid 51.74 48.28
TraesCS3B01G399600.1 Wheat plastid 51.52 48.17
Zm00001d010079_P001 Maize plastid 51.96 47.99
Zm00001d012333_P001 Maize plastid 52.17 47.06
EES19625 Sorghum plastid 52.61 46.99
TraesCS1B01G287800.1 Wheat cytosol, plastid 51.09 44.59
TraesCS1A01G278800.1 Wheat cytosol, plastid 51.09 44.51
HORVU3Hr1G085100.2 Barley plastid 51.52 44.38
HORVU1Hr1G073330.1 Barley cytosol 51.09 42.19
TraesCS1D01G278100.1 Wheat plastid 51.09 41.16
Solyc04g078660.1.1 Tomato cytosol 39.13 40.18
Solyc01g107070.2.1 Tomato cytosol, mitochondrion 14.35 38.82
Solyc08g005890.2.1 Tomato cytosol 35.65 37.53
Solyc02g093180.2.1 Tomato mitochondrion 35.0 35.54
Solyc04g078350.1.1 Tomato cytosol 12.61 35.15
Solyc12g096250.1.1 Tomato cytosol 33.7 34.14
Solyc01g107080.2.1 Tomato cytoskeleton, cytosol, peroxisome 30.87 33.81
Solyc10g055730.1.1 Tomato cytosol 22.17 33.22
Solyc02g062710.1.1 Tomato cytosol 31.3 31.86
Solyc01g107050.2.1 Tomato cytosol 11.09 30.91
Solyc03g025320.2.1 Tomato cytosol, nucleus 30.0 30.53
Protein Annotations
EnsemblPlants:Solyc09g014280.1.1EnsemblPlantsGene:Solyc09g014280.1Gene3D:3.30.559.10GO:GO:0003674GO:GO:0003824GO:GO:0016740
GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31896PANTHER:PTHR31896:SF5
PFAM:PF02458SUPFAM:SSF52777UniParc:UPI000276B739UniProt:K4CRQ5MapMan:35.1:
Description
No Description!
Coordinates
chr9:+:5772957..5774339
Molecular Weight (calculated)
51151.3 Da
IEP (calculated)
8.559
GRAVY (calculated)
-0.228
Length
460 amino acids
Sequence
(BLAST)
001: MPTSSLFVVS KCTIYPDHHT SLNNTLKLSV SDLPMLSCQY IQKGVLLTQS PFESSNSLIS HLKTALSKTL SHFPPLAGRL ITDSDGYVYI LCNDAGIDFV
101: HTKAPHLMIS TLVPQNQSDI PIYFRKFFQF DKTLSYAGHH KPLMAIQVTE LNDAVFIGCT MNHAVVDGTS FWNFFNTFAE FSKGEMKITR QPCFGRKTVF
201: DSPAVLKFPE GGPSATFSGD EPLREKIFHF SREAILKLKL RANKTGVNGK TNGKITPVND ETGLKNGAAM KNSASEISSF QSLSAQLWRS VTRARKLEGN
301: KTTTFRMAVN CRHRLEQRLE PLYFGNAIQS IPTIASVKEL LSNDLYWSAN QLHQNVVAHG DVTVRQGVKD WESNPRLFPL GNFDGAMITM GSSPRFPMYD
401: NDFGWGRPVA VRSGMANKFD GKISAFPGRE GNGTVDLEVV LAPETMVGLE EDMEFMQYVS
Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)
001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC
Arabidopsis Description
AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.