Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
- plastid 3
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400052409 | Potato | cytosol, plastid | 95.87 | 95.87 |
KRH66032 | Soybean | cytosol | 65.43 | 64.45 |
VIT_08s0007g01930.t01 | Wine grape | plastid | 69.13 | 64.37 |
CDY40314 | Canola | cytosol | 63.26 | 63.82 |
Bra009632.1-P | Field mustard | plastid | 57.17 | 63.53 |
KRH75833 | Soybean | cytosol | 65.43 | 63.5 |
AT5G01210.1 | Thale cress | cytosol | 64.78 | 62.74 |
Solyc05g052680.1.1 | Tomato | cytosol, plastid | 61.74 | 62.14 |
Bra028893.1-P | Field mustard | cytosol, plastid | 64.13 | 61.59 |
Solyc05g052670.1.1 | Tomato | plastid | 60.65 | 60.52 |
CDY48117 | Canola | endoplasmic reticulum, nucleus, peroxisome | 64.13 | 58.42 |
CDY55902 | Canola | endoplasmic reticulum, nucleus, peroxisome | 63.48 | 57.48 |
GSMUA_Achr10P... | Banana | plastid | 48.04 | 52.74 |
GSMUA_Achr8P19570_001 | Banana | plastid | 46.96 | 51.18 |
GSMUA_AchrUn_... | Banana | plastid | 44.78 | 49.64 |
Zm00001d042826_P001 | Maize | plastid | 52.17 | 49.59 |
Os05t0449200-01 | Rice | plastid | 51.52 | 49.38 |
EES01771 | Sorghum | plastid | 52.83 | 49.09 |
Os01t0854000-01 | Rice | plastid | 51.52 | 49.07 |
TraesCS3A01G367900.1 | Wheat | plastid | 51.96 | 48.48 |
TraesCS3D01G360900.1 | Wheat | plastid | 51.74 | 48.28 |
TraesCS3B01G399600.1 | Wheat | plastid | 51.52 | 48.17 |
Zm00001d010079_P001 | Maize | plastid | 51.96 | 47.99 |
Zm00001d012333_P001 | Maize | plastid | 52.17 | 47.06 |
EES19625 | Sorghum | plastid | 52.61 | 46.99 |
TraesCS1B01G287800.1 | Wheat | cytosol, plastid | 51.09 | 44.59 |
TraesCS1A01G278800.1 | Wheat | cytosol, plastid | 51.09 | 44.51 |
HORVU3Hr1G085100.2 | Barley | plastid | 51.52 | 44.38 |
HORVU1Hr1G073330.1 | Barley | cytosol | 51.09 | 42.19 |
TraesCS1D01G278100.1 | Wheat | plastid | 51.09 | 41.16 |
Solyc04g078660.1.1 | Tomato | cytosol | 39.13 | 40.18 |
Solyc01g107070.2.1 | Tomato | cytosol, mitochondrion | 14.35 | 38.82 |
Solyc08g005890.2.1 | Tomato | cytosol | 35.65 | 37.53 |
Solyc02g093180.2.1 | Tomato | mitochondrion | 35.0 | 35.54 |
Solyc04g078350.1.1 | Tomato | cytosol | 12.61 | 35.15 |
Solyc12g096250.1.1 | Tomato | cytosol | 33.7 | 34.14 |
Solyc01g107080.2.1 | Tomato | cytoskeleton, cytosol, peroxisome | 30.87 | 33.81 |
Solyc10g055730.1.1 | Tomato | cytosol | 22.17 | 33.22 |
Solyc02g062710.1.1 | Tomato | cytosol | 31.3 | 31.86 |
Solyc01g107050.2.1 | Tomato | cytosol | 11.09 | 30.91 |
Solyc03g025320.2.1 | Tomato | cytosol, nucleus | 30.0 | 30.53 |
Protein Annotations
EnsemblPlants:Solyc09g014280.1.1 | EnsemblPlantsGene:Solyc09g014280.1 | Gene3D:3.30.559.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 |
GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31896 | PANTHER:PTHR31896:SF5 |
PFAM:PF02458 | SUPFAM:SSF52777 | UniParc:UPI000276B739 | UniProt:K4CRQ5 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr9:+:5772957..5774339
Molecular Weight (calculated)
51151.3 Da
IEP (calculated)
8.559
GRAVY (calculated)
-0.228
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTSSLFVVS KCTIYPDHHT SLNNTLKLSV SDLPMLSCQY IQKGVLLTQS PFESSNSLIS HLKTALSKTL SHFPPLAGRL ITDSDGYVYI LCNDAGIDFV
101: HTKAPHLMIS TLVPQNQSDI PIYFRKFFQF DKTLSYAGHH KPLMAIQVTE LNDAVFIGCT MNHAVVDGTS FWNFFNTFAE FSKGEMKITR QPCFGRKTVF
201: DSPAVLKFPE GGPSATFSGD EPLREKIFHF SREAILKLKL RANKTGVNGK TNGKITPVND ETGLKNGAAM KNSASEISSF QSLSAQLWRS VTRARKLEGN
301: KTTTFRMAVN CRHRLEQRLE PLYFGNAIQS IPTIASVKEL LSNDLYWSAN QLHQNVVAHG DVTVRQGVKD WESNPRLFPL GNFDGAMITM GSSPRFPMYD
401: NDFGWGRPVA VRSGMANKFD GKISAFPGRE GNGTVDLEVV LAPETMVGLE EDMEFMQYVS
101: HTKAPHLMIS TLVPQNQSDI PIYFRKFFQF DKTLSYAGHH KPLMAIQVTE LNDAVFIGCT MNHAVVDGTS FWNFFNTFAE FSKGEMKITR QPCFGRKTVF
201: DSPAVLKFPE GGPSATFSGD EPLREKIFHF SREAILKLKL RANKTGVNGK TNGKITPVND ETGLKNGAAM KNSASEISSF QSLSAQLWRS VTRARKLEGN
301: KTTTFRMAVN CRHRLEQRLE PLYFGNAIQS IPTIASVKEL LSNDLYWSAN QLHQNVVAHG DVTVRQGVKD WESNPRLFPL GNFDGAMITM GSSPRFPMYD
401: NDFGWGRPVA VRSGMANKFD GKISAFPGRE GNGTVDLEVV LAPETMVGLE EDMEFMQYVS
001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC
Arabidopsis Description
AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.