Factsheet for TraesCS1A01G278800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G287800.1	Wheat	cytosol, plastid	96.97	97.15
TraesCS1D01G278100.1	Wheat	plastid	98.3	90.89
HORVU1Hr1G073330.1	Barley	cytosol	89.58	84.92
Os05t0449200-01	Rice	plastid	72.35	79.58
Zm00001d010079_P001	Maize	plastid	72.92	77.31
EES19625	Sorghum	plastid	73.86	75.73
TraesCS3A01G367900.1	Wheat	plastid	65.72	70.39
GSMUA_Achr10P...	Banana	plastid	46.59	58.71
GSMUA_Achr8P19570_001	Banana	plastid	45.83	57.35
CDY40314	Canola	cytosol	46.78	54.17
CDX74815	Canola	cytosol, plastid	44.51	54.15
GSMUA_AchrUn_...	Banana	plastid	42.23	53.73
CDY07045	Canola	peroxisome	45.45	53.33
AT5G01210.1	Thale cress	cytosol	47.92	53.26
PGSC0003DMT400069897	Potato	plastid	46.4	53.26
Solyc05g052680.1.1	Tomato	cytosol, plastid	46.02	53.17
PGSC0003DMT400069898	Potato	cytosol	46.02	53.17
Bra009632.1-P	Field mustard	plastid	41.67	53.14
PGSC0003DMT400069755	Potato	cytosol, plastid	46.59	53.13
KRH66032	Soybean	cytosol	46.97	53.1
Bra028893.1-P	Field mustard	cytosol, plastid	47.92	52.82
CDX93218	Canola	peroxisome	44.89	52.55
KRH75833	Soybean	cytosol	47.16	52.53
KRH73150	Soybean	cytosol, plastid	47.54	52.51
Solyc05g052670.1.1	Tomato	plastid	45.83	52.49
CDY24938	Canola	cytosol, plastid	45.27	52.07
KRH14988	Soybean	cytosol, plastid	46.78	51.57
Bra017041.1-P	Field mustard	cytosol	45.83	51.49
PGSC0003DMT400052409	Potato	cytosol, plastid	44.7	51.3
Bra004996.1-P	Field mustard	cytosol	46.4	51.15
Solyc09g014280.1.1	Tomato	cytosol, plastid	44.51	51.09
AT2G39980.1	Thale cress	cytosol, plastid	46.59	51.04
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	47.54	49.7
VIT_08s0007g01930.t01	Wine grape	plastid	46.4	49.6
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	47.35	49.21
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	45.27	49.08
KRG97771	Soybean	plastid	42.8	47.78
KRH31113	Soybean	plastid	43.18	46.25
TraesCS4A01G426400.1	Wheat	cytosol	26.33	39.27
TraesCS3A01G127300.1	Wheat	plastid	33.9	38.17
TraesCS4A01G495900.1	Wheat	plastid	34.09	37.97
TraesCS1A01G286400.1	Wheat	cytosol	32.95	37.5
TraesCS7A01G002700.1	Wheat	plastid	33.71	37.47
TraesCS4A01G401500.1	Wheat	plastid	33.9	37.45
TraesCS1A01G286500.1	Wheat	cytosol	30.11	36.22
TraesCS1A01G029500.1	Wheat	peroxisome, plastid	31.82	35.59
TraesCS4A01G350100.1	Wheat	cytosol	31.63	35.46
TraesCS2A01G467400.1	Wheat	cytosol	31.44	35.39
TraesCS3A01G025000.1	Wheat	cytosol	19.32	34.81
TraesCS2A01G042800.1	Wheat	cytosol	30.11	34.05
TraesCS2A01G035600.1	Wheat	cytosol	18.37	34.04
TraesCS1A01G341300.1	Wheat	golgi, unclear	28.6	33.78
TraesCS1A01G008500.1	Wheat	cytosol, plastid	30.11	33.69
TraesCS2A01G035800.1	Wheat	cytosol	29.17	32.91
TraesCS2A01G006700.1	Wheat	cytosol	26.33	32.1
TraesCS3A01G024800.1	Wheat	cytosol, extracellular, plastid	26.52	31.67
TraesCS2A01G036200.1	Wheat	cytosol	28.22	29.22
TraesCS2A01G035900.1	Wheat	mitochondrion	28.98	28.54
TraesCS2A01G006200.1	Wheat	cytosol	28.03	28.52

Protein Annotations

EnsemblPlants:TraesCS1A01G278800.1	EnsemblPlantsGene:TraesCS1A01G278800	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF23
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr1A:-:474430833..474432419

Molecular Weight (calculated)

56189.2 Da

IEP (calculated)

7.651

GRAVY (calculated)

0.028

Length

528 amino acids

Sequence
(BLAST)

001: MNPDPAPCLY NVSTTERCPT PSCVTPSPRA RAAATTHSMA PPISADVVVE AAPAPASMAV LNQMVCAGAP APSITVVSKQ LVLPEGAPPV GDLRLSVSDM
101: PMLSCHYIQK GLFFPPAGMP NARLVSSLAL SLSRALGVFP ALAGRLVTLP DDRIVIRCDD GAAVEFYHAV APALSLADFL VRDADVPTRL TKDLFPMDRT
201: VSYEGHRRPL TSFQVTVLGD GAVFVGLVAN HAVVDGTSFW HFFNTWAGLC RGEPVQPPDF SRNFFGGSTA VLRFSGRDGP AVTFDASAPL RERVINFSAA
301: SIRGLKAAAN RCRKSNEDDE VKGKLVHDLK VQGGCGEISS FQSMCAHMWR AVTRARLQLA ADATTTFRMA VNCRHRLRPK ISPVYFGNAI QSVATTATVA
401: ELASHDLGWA AARLHATVVA HEDGAIRKAA ADWEAAPRCF PLGNPDGAAL TMGSSPRFPM YDGNDFGWGR ALAVRSGRAN KFDGKMSAFP GQAGDGSVDV
501: EVCLAPDTMG RLLCDDEFLQ FVSHAPSP

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.