Factsheet for TraesCS1A01G008500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G052500.1	Wheat	cytosol, plastid	92.8	93.79
TraesCS7D01G316600.1	Wheat	cytosol	65.68	66.81
HORVU7Hr1G076490.1	Barley	cytosol	66.31	66.45
TraesCS2A01G467400.1	Wheat	cytosol	55.51	55.86
TraesCS2A01G035800.1	Wheat	cytosol	55.3	55.77
TraesCS4A01G350100.1	Wheat	cytosol	54.87	54.99
TraesCS1A01G029500.1	Wheat	peroxisome, plastid	54.24	54.24
TraesCS1A01G286500.1	Wheat	cytosol	50.21	53.99
TraesCS1A01G286400.1	Wheat	cytosol	52.75	53.66
TraesCS2A01G042800.1	Wheat	cytosol	52.54	53.1
TraesCS2A01G035600.1	Wheat	cytosol	31.99	52.98
TraesCS2A01G006700.1	Wheat	cytosol	48.52	52.89
TraesCS3A01G024800.1	Wheat	cytosol, extracellular, plastid	49.36	52.71
TraesCS2A01G036200.1	Wheat	cytosol	54.87	50.78
TraesCS3A01G025000.1	Wheat	cytosol	30.93	49.83
TraesCS2A01G035900.1	Wheat	mitochondrion	55.72	49.07
TraesCS2A01G006200.1	Wheat	cytosol	50.85	46.24
TraesCS3A01G127300.1	Wheat	plastid	36.86	37.1
TraesCS4A01G495900.1	Wheat	plastid	36.23	36.08
TraesCS7A01G002700.1	Wheat	plastid	36.23	36.0
TraesCS4A01G426400.1	Wheat	cytosol	26.91	35.88
TraesCS4A01G401500.1	Wheat	plastid	36.23	35.77
TraesCS1A01G341300.1	Wheat	golgi, unclear	30.51	32.21
TraesCS3A01G367900.1	Wheat	plastid	32.84	31.44
TraesCS1A01G278800.1	Wheat	cytosol, plastid	33.69	30.11

Protein Annotations

EnsemblPlants:TraesCS1A01G008500.1	EnsemblPlantsGene:TraesCS1A01G008500	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF9
PFAM:PF02458	SEG:seg	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr1A:+:4811529..4812947

Molecular Weight (calculated)

50559.1 Da

IEP (calculated)

6.876

GRAVY (calculated)

0.008

Length

472 amino acids

Sequence
(BLAST)

001: MATEASASAC QHGVRIVSRR MVRPASDGET ETTTKPKSTE TVHLTPWDLQ MLTVDYIQMG VLLPRPPTPT TAEHMVDHLA QSLARAVARF YPYAGRLATE
101: EHTGGSVTVS LQCTGHGAEF VHAVAADTNV ADVAGSLSIP SVVWSFFPLN GLVGADAAVG SRSGSRIPVL AAQVTELADG VFVAISLNHG VADGTAFWHL
201: FNTWSEISRS SWNGSSEAIA TPEPVLERWF PDGCPVPVPL PFPTLDHAVR RFHGPPVEEC FLAFSAESIR SLKARANAEI SGTATVSSLQ SLLAHLWLAV
301: TRARRLRPEQ ETSYTLAVSC RGRVKRVPQL YSGNSMVRCA TAKVAAGEIL RGGLRSAAWR LNRAVASCDE AALVGSTAAW HTEPPFAYLV GWWHPALLVT
401: GNSPRFDVFG NDFGWGRPVA VRSGGGNKVD GRATVYELGR EGGIGMELCL APEALARLIA DDEFMALLNQ GQ

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.