Factsheet for TraesCS1A01G341300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, unclear
Any Predictor:	cytosol, peroxisome
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G354000.1	Wheat	cytosol	98.43	98.65
TraesCS1D01G343400.1	Wheat	golgi	97.76	97.76
HORVU1Hr1G075900.1	Barley	cytosol	96.2	95.77
Zm00001d031893_P001	Maize	mitochondrion	81.88	82.43
Os08t0562500-01	Rice	plastid	80.54	80.9
EES14067	Sorghum	cytosol, peroxisome, plastid	82.1	78.59
GSMUA_AchrUn_...	Banana	cytosol	66.44	66.59
PGSC0003DMT400026230	Potato	cytosol	47.87	53.1
VIT_16s0050g00830.t01	Wine grape	cytosol	52.35	52.58
KRH08886	Soybean	cytosol, nucleus	51.45	51.22
KRH38407	Soybean	cytosol	51.23	51.12
Solyc03g025320.2.1	Tomato	cytosol, nucleus	51.45	50.88
CDY44265	Canola	cytosol	51.45	48.94
Bra029388.1-P	Field mustard	cytosol	51.45	48.32
Bra009716.1-P	Field mustard	cytosol	49.89	48.27
CDX80398	Canola	cytosol	49.89	48.06
CDX88059	Canola	cytosol	50.34	47.87
AT5G23940.1	Thale cress	mitochondrion	50.56	46.69
VIT_16s0050g00870.t01	Wine grape	cytosol	52.57	39.63
TraesCS4A01G426400.1	Wheat	cytosol	27.29	34.46
TraesCS4A01G401500.1	Wheat	plastid	36.02	33.68
TraesCS2A01G467400.1	Wheat	cytosol	34.9	33.26
TraesCS4A01G495900.1	Wheat	plastid	34.9	32.91
TraesCS7A01G002700.1	Wheat	plastid	34.23	32.21
TraesCS3A01G127300.1	Wheat	plastid	33.78	32.2
TraesCS2A01G042800.1	Wheat	cytosol	32.66	31.26
TraesCS4A01G350100.1	Wheat	cytosol	32.89	31.21
TraesCS2A01G035800.1	Wheat	cytosol	32.44	30.98
TraesCS1A01G286400.1	Wheat	cytosol	31.99	30.82
TraesCS3A01G024800.1	Wheat	cytosol, extracellular, plastid	30.2	30.54
TraesCS1A01G008500.1	Wheat	cytosol, plastid	32.21	30.51
TraesCS1A01G286500.1	Wheat	cytosol	29.53	30.07
TraesCS3A01G025000.1	Wheat	cytosol	19.46	29.69
TraesCS3A01G367900.1	Wheat	plastid	32.66	29.61
TraesCS2A01G006700.1	Wheat	cytosol	28.64	29.56
TraesCS2A01G035600.1	Wheat	cytosol	18.57	29.12
TraesCS1A01G029500.1	Wheat	peroxisome, plastid	30.65	29.03
TraesCS1A01G278800.1	Wheat	cytosol, plastid	33.78	28.6
TraesCS2A01G036200.1	Wheat	cytosol	31.32	27.45
TraesCS2A01G035900.1	Wheat	mitochondrion	32.21	26.87
TraesCS2A01G006200.1	Wheat	cytosol	28.86	24.86

Protein Annotations

MapMan:21.9.5.3	Gene3D:3.30.559.10	InterPro:CAT-like_dom_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009653	GO:GO:0009987	GO:GO:0010090	GO:GO:0010143	GO:GO:0016043
GO:GO:0016740	GO:GO:0016747	GO:GO:0030154	GO:GO:0051179	GO:GO:0090626	InterPro:IPR023213
PFAM:PF02458	PANTHER:PTHR31896	PANTHER:PTHR31896:SF4	EnsemblPlantsGene:TraesCS1A01G341300	EnsemblPlants:TraesCS1A01G341300.1	InterPro:Transferase
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1A:+:531023845..531028321

Molecular Weight (calculated)

47603.8 Da

IEP (calculated)

5.312

GRAVY (calculated)

-0.038

Length

447 amino acids

Sequence
(BLAST)

001: MAVDSGDAAA MAVAVTGTRT VAPAKTKVTL ATFDLPYITF YYNQKLLLYR LPQGAADFQD VTARMADALG DALAYFYPLA GRIRQEKGDG GALYVDGEEG
101: AEVVEAAAEG VSVDQLAGED CGEEAEKLMQ QLIPYTGVMN LEGLHRPLLA VQFTKLKDGL AVGCAFNHAV LDGTATWHFM SSWAELCRGA AAPSALPIHN
201: RAMARSVRVG LTLPASAEAH EKTDPNGPKK PLVARVFSFS EPVVARIKAN ANAALPPGAK PFSAFQSLGA HIWRSVSRAR ELGPADITVF AVFADCRARL
301: DPPVPATYFG NLIQAVFTGV PAGMLLGGPP ELAAGMLQKA IGEHDAAAVT RRLDEYEAAP KLFHYSDAGP NCVAVGSSPR FRVYDVDFGF GRPERVRSGG
401: NNKFDGMVYL YPGRGGDSGG IDVELALQPE PMQRLEKDEE FLQIAAA

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.