Factsheet for Bra009716.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80398	Canola	cytosol	97.62	97.2
CDX88059	Canola	cytosol	98.48	96.81
Bra029388.1-P	Field mustard	cytosol	90.26	87.61
AT5G23940.1	Thale cress	mitochondrion	88.1	84.09
KRH08886	Soybean	cytosol, nucleus	62.99	64.81
PGSC0003DMT400026230	Potato	cytosol	56.28	64.52
KRH38407	Soybean	cytosol	62.34	64.29
VIT_16s0050g00830.t01	Wine grape	cytosol	61.26	63.6
Solyc03g025320.2.1	Tomato	cytosol, nucleus	61.47	62.83
GSMUA_AchrUn_...	Banana	cytosol	52.81	54.71
Zm00001d031893_P001	Maize	mitochondrion	48.05	50.0
TraesCS1B01G354000.1	Wheat	cytosol	48.27	50.0
HORVU1Hr1G075900.1	Barley	cytosol	48.48	49.89
TraesCS1A01G341300.1	Wheat	golgi, unclear	48.27	49.89
TraesCS1D01G343400.1	Wheat	golgi	48.05	49.66
Os08t0562500-01	Rice	plastid	46.75	48.54
EES14067	Sorghum	cytosol, peroxisome, plastid	48.27	47.75
VIT_16s0050g00870.t01	Wine grape	cytosol	59.96	46.71
Bra005957.1-P	Field mustard	plastid	14.5	35.26
Bra029999.1-P	Field mustard	cytosol	23.16	33.02
Bra035334.1-P	Field mustard	cytosol	31.82	32.74
Bra028682.1-P	Field mustard	cytosol	26.62	31.54
Bra009632.1-P	Field mustard	plastid	27.92	31.16
Bra028893.1-P	Field mustard	cytosol, plastid	32.03	30.9
Bra012137.1-P	Field mustard	cytosol	29.65	30.79
Bra017041.1-P	Field mustard	cytosol	30.52	30.0
Bra003184.1-P	Field mustard	cytosol	28.79	29.89
Bra037763.1-P	Field mustard	cytosol	27.49	29.74
Bra033050.1-P	Field mustard	extracellular, golgi	22.94	29.36
Bra028681.1-P	Field mustard	cytosol	28.79	29.3
Bra004996.1-P	Field mustard	cytosol	29.65	28.6
Bra028199.1-P	Field mustard	cytosol	27.71	28.57
Bra036069.1-P	Field mustard	plastid	27.71	28.44
Bra002962.1-P	Field mustard	cytosol	28.79	28.3
Bra030000.1-P	Field mustard	cytosol	11.04	28.18
Bra037126.1-P	Field mustard	cytosol	27.49	28.1
Bra012138.1-P	Field mustard	cytosol	26.19	27.69
Bra015058.1-P	Field mustard	cytosol, plastid	26.41	26.99
Bra028166.1-P	Field mustard	cytosol	15.58	26.18

Protein Annotations

EnsemblPlants:Bra009716.1	EnsemblPlants:Bra009716.1-P	EnsemblPlantsGene:Bra009716	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF4	PFAM:PF02458	SEG:seg	UniParc:UPI000253F10D	UniProt:M4CZR9	MapMan:21.9.5.3

Description

AT5G23940 (E=7e-226) EMB3009 | EMB3009 (embryo defective 3009); transferase/ transferase, transferring acyl groups other than amino-acyl groups

Coordinates

chrA06:-:16725900..16728847

Molecular Weight (calculated)

51199.8 Da

IEP (calculated)

5.268

GRAVY (calculated)

-0.287

Length

462 amino acids

Sequence
(BLAST)

001: MKIKITSKTH VKPNKPILGK QQFQLTTFDL PYLAFYYNQK FLLYKFENLL DLEEPTFQNN VVEKLKDGLS SVLEDFYQLA GKLAKDDEGV FRVEYDADDE
101: EINGVEFSVA EAPDVSVGDL TVEDGTAKLE ELVPYSRISN LEGLSRPLLV IQVTKLKDGL AMGLAFNHAV LDGTATWHFM SSWAEICRGA KTISTQPFLD
201: RAKARDTRVK LDLTAPKDPN AGDGAAEPPQ LVEKVFRFSD SAIHTIKSRA NSVIPSDGSK PFSTFQSLTS HIWRHVTLAR GLKPEDITVF TVFADCRRRV
301: DPPMPEEYFG NMIQAIFTGT AAGLLAAHGP EFGASVVQKA IVAHEARVVD ARNEEWEKSP KIFQFKDAGV NCVAVGSSPR FKVYEVDFGW GKPETVRSGS
401: NNRFNGMMYL YQGKAGGISI DVEISLEAHV MEKLEKSKEF LLVEEEDGKN LSNGNANGNG LV

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.