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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009716.1-P Field mustard cytosol 96.81 98.48
CDX80398 Canola cytosol 97.02 98.28
CDY44265 Canola cytosol 88.72 88.72
AT5G23940.1 Thale cress mitochondrion 87.23 84.71
PGSC0003DMT400026230 Potato cytosol 55.53 64.76
KRH08886 Soybean cytosol, nucleus 61.7 64.59
KRH38407 Soybean cytosol 61.06 64.06
VIT_16s0050g00830.t01 Wine grape cytosol 60.43 63.82
Solyc03g025320.2.1 Tomato cytosol, nucleus 60.64 63.05
GSMUA_AchrUn_... Banana cytosol 51.91 54.71
TraesCS1A01G341300.1 Wheat golgi, unclear 47.87 50.34
Zm00001d031893_P001 Maize mitochondrion 47.45 50.23
TraesCS1B01G354000.1 Wheat cytosol 47.45 50.0
HORVU1Hr1G075900.1 Barley cytosol 47.66 49.89
TraesCS1D01G343400.1 Wheat golgi 47.23 49.66
Os08t0562500-01 Rice plastid 46.17 48.76
EES14067 Sorghum cytosol, peroxisome, plastid 47.66 47.97
VIT_16s0050g00870.t01 Wine grape cytosol 59.15 46.88
CDY17759 Canola cytosol 6.6 38.75
CDY02424 Canola cytosol 31.28 32.74
CDY21238 Canola cytosol 30.85 32.29
CDY40314 Canola cytosol 30.64 31.58
CDY40772 Canola cytosol, nucleus, plastid 27.66 31.48
CDX83118 Canola mitochondrion, plastid 30.0 31.4
CDY14027 Canola cytosol, nucleus, plastid 27.45 31.39
CDY07045 Canola peroxisome 30.0 31.33
CDX93218 Canola peroxisome 29.57 30.82
CDX71519 Canola cytosol, nucleus, plastid 29.36 30.73
CDY01434 Canola cytosol 28.72 30.34
CDY07540 Canola cytosol 28.72 30.27
CDY14025 Canola extracellular 9.79 30.26
CDY04024 Canola cytosol 10.21 30.19
CDX74815 Canola cytosol, plastid 27.66 29.95
CDX81074 Canola plastid 29.15 29.78
CDY18724 Canola cytosol 27.02 29.74
CDY47247 Canola plasma membrane 23.19 29.54
CDY48117 Canola endoplasmic reticulum, nucleus, peroxisome 31.7 29.5
CDY24938 Canola cytosol, plastid 28.51 29.19
CDY40431 Canola cytosol 27.87 29.11
CDY55902 Canola endoplasmic reticulum, nucleus, peroxisome 31.28 28.94
CDX81073 Canola cytosol 28.3 28.85
CDX81339 Canola cytosol 27.45 28.54
CDY01691 Canola plastid 26.38 28.38
CDX74510 Canola cytosol 27.02 28.35
CDY12811 Canola extracellular 28.51 28.33
CDY32573 Canola cytosol 22.34 28.23
CDX83119 Canola cytosol 10.85 28.18
CDX78313 Canola cytosol 28.09 28.03
CDY47454 Canola cytosol 27.23 27.95
CDY18638 Canola cytosol 26.81 27.88
CDY01433 Canola cytosol 25.74 27.69
CDY40771 Canola cytosol 28.3 27.42
CDY14026 Canola cytosol 14.89 27.34
CDY12812 Canola cytosol 16.81 27.34
CDY30596 Canola extracellular 15.53 27.24
CDY39539 Canola cytosol, plastid 25.53 26.55
CDX74540 Canola cytosol 22.77 26.42
CDX77413 Canola cytosol, plastid 17.66 25.94
CDX68582 Canola mitochondrion 7.87 25.17
CDX97348 Canola cytosol 9.57 18.91
CDY61372 Canola cytosol 9.57 18.59
CDY66079 Canola cytosol 3.83 9.89
Protein Annotations
EnsemblPlants:CDX88059EnsemblPlantsGene:GSBRNA2T00147473001Gene3D:3.30.559.10GO:A0A078DHZ4GO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31896
PANTHER:PTHR31896:SF4PFAM:PF02458ProteinID:CDX88059ProteinID:CDX88059.1SEG:segUniParc:UPI0004EDE9B7
MapMan:21.9.5.3:::::
Description
BnaA06g26500D
Coordinates
chrLK031854:-:344075..346645
Molecular Weight (calculated)
51818.3 Da
IEP (calculated)
5.385
GRAVY (calculated)
-0.330
Length
470 amino acids
Sequence
(BLAST)
001: MKIKITSKTH VKPNKPILGK QQFQLTTFDL PYLAFYYNQK FLLYKFQNPL DLEESTFQNN VVEKLKDGLS SVLEDFYQLA GKLAKDDEGV FRVEYDADDE
101: ETNGVEFSVA EAPDVSVGDL TVEDGTAKLE ELVPYSRISN LEGLSRPLLV IQVTKLKDGL AMGLAFNHAV LDGTATWHFM SSWAEICRGA KTISTQPFLD
201: RAKARDTRVK LDLTAPKDPN AGDGAAEPPQ LVEKVFRFSD SAIHTIKSRA NSVIPSDGSK PFSTFQSLTS HIWRHVTLAR GLKPEDITVF TVFADCRRRV
301: DPPMPEEYFG NMIQAIFTGT AAGLLAAHGP EFGASVVQKA IVAHDARVVD ARNEEWEKSP KIFQFKDAGV NCVAVGSSPR FKVYEVDFGW GKPETVRSGS
401: NNRFNGMMYL YQGKAGGISI DVEISLEAHV MEKLEKSKEF LLIEEEDGKS LSNGNGNGNG NGNANGNGLV
Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)
001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV
Arabidopsis Description
DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.