Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid
BaCelLo:cytosol
MultiLoc:peroxisome
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY07045 Canola peroxisome 93.79 94.0
CDX74815 Canola cytosol, plastid 82.04 85.25
CDY24938 Canola cytosol, plastid 84.92 83.44
AT2G39980.1 Thale cress cytosol, plastid 83.37 78.01
PGSC0003DMT400069898 Potato cytosol 65.41 64.55
PGSC0003DMT400069755 Potato cytosol, plastid 66.08 64.36
Solyc05g052670.1.1 Tomato plastid 65.41 63.99
PGSC0003DMT400069897 Potato plastid 65.19 63.91
Solyc05g052680.1.1 Tomato cytosol, plastid 64.75 63.9
CDY40314 Canola cytosol 61.64 60.96
VIT_13s0019g03430.t01 Wine grape cytosol, peroxisome, plastid 64.3 59.55
CDY48117 Canola endoplasmic reticulum, nucleus, peroxisome 64.08 57.23
CDY55902 Canola endoplasmic reticulum, nucleus, peroxisome 64.08 56.89
GSMUA_Achr10P... Banana plastid 52.33 56.32
GSMUA_Achr8P19570_001 Banana plastid 50.78 54.27
KRG97771 Soybean plastid 56.32 53.7
GSMUA_AchrUn_... Banana plastid 48.56 52.77
KRH31113 Soybean plastid 56.76 51.93
Os01t0854000-01 Rice plastid 54.55 50.93
Zm00001d042826_P001 Maize plastid 54.55 50.83
TraesCS3A01G367900.1 Wheat plastid 55.43 50.71
EES01771 Sorghum plastid 55.65 50.71
TraesCS3D01G360900.1 Wheat plastid 55.21 50.51
TraesCS3B01G399600.1 Wheat plastid 54.99 50.41
Os05t0449200-01 Rice plastid 52.33 49.17
Zm00001d012333_P001 Maize plastid 55.21 48.82
Zm00001d010079_P001 Maize plastid 53.22 48.19
HORVU3Hr1G085100.2 Barley plastid 55.65 47.0
EES19625 Sorghum plastid 53.44 46.8
CDY17759 Canola cytosol 7.98 45.0
TraesCS1A01G278800.1 Wheat cytosol, plastid 52.55 44.89
TraesCS1B01G287800.1 Wheat cytosol, plastid 52.11 44.59
CDY14025 Canola extracellular 14.41 42.76
HORVU1Hr1G073330.1 Barley cytosol 51.88 42.01
TraesCS1D01G278100.1 Wheat plastid 52.33 41.33
CDY40772 Canola cytosol, nucleus, plastid 37.25 40.68
CDY14027 Canola cytosol, nucleus, plastid 36.81 40.39
CDX71519 Canola cytosol, nucleus, plastid 39.91 40.09
CDY21238 Canola cytosol 39.47 39.64
CDY02424 Canola cytosol 39.47 39.64
CDX81073 Canola cytosol 38.14 37.31
CDX78313 Canola cytosol 38.58 36.94
CDX81074 Canola plastid 37.25 36.52
CDY40771 Canola cytosol 36.36 33.81
CDY18724 Canola cytosol 31.26 33.02
CDX83118 Canola mitochondrion, plastid 32.37 32.52
CDY07540 Canola cytosol 31.93 32.29
CDY04024 Canola cytosol 11.31 32.08
CDX68582 Canola mitochondrion 10.42 31.97
CDX97348 Canola cytosol 16.85 31.93
CDX77413 Canola cytosol, plastid 22.62 31.88
CDY01434 Canola cytosol 31.26 31.69
CDX74510 Canola cytosol 31.04 31.25
CDY61372 Canola cytosol 16.63 30.99
CDX83119 Canola cytosol 12.42 30.94
CDY14026 Canola cytosol 17.52 30.86
CDY39539 Canola cytosol, plastid 30.82 30.75
CDY40431 Canola cytosol 30.38 30.44
CDY47247 Canola plasma membrane 24.83 30.35
CDY12811 Canola extracellular 31.71 30.23
CDX80398 Canola cytosol 31.04 30.17
CDY47454 Canola cytosol 30.38 29.91
CDY30596 Canola extracellular 17.74 29.85
CDY32573 Canola cytosol 24.61 29.84
CDX88059 Canola cytosol 30.82 29.57
CDY18638 Canola cytosol 29.49 29.42
CDY44265 Canola cytosol 30.6 29.36
CDY01691 Canola plastid 28.38 29.29
CDX81339 Canola cytosol 29.05 28.98
CDY01433 Canola cytosol 27.49 28.38
CDX74540 Canola cytosol 25.28 28.15
CDY12812 Canola cytosol 17.96 28.03
CDY66079 Canola cytosol 6.43 15.93
Protein Annotations
EnsemblPlants:CDX93218EnsemblPlantsGene:GSBRNA2T00155173001Gene3D:3.30.559.10GO:A0A078E0W9GO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:Transferasencoils:Coil
PANTHER:PTHR31896PANTHER:PTHR31896:SF11PFAM:PF02458ProteinID:CDX93218ProteinID:CDX93218.1SEG:seg
SUPFAM:SSF52777UniParc:UPI0004EE799EMapMan:50.2.3:::
Description
BnaC04g46780D
Coordinates
chrLK031875:+:409230..410831
Molecular Weight (calculated)
49308.6 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.163
Length
451 amino acids
Sequence
(BLAST)
001: MPSLENSVTV ISTNKVFPDK KSTLADLKLS VSDLPMLSCH YIQKGCLFTR PHLTPQELLS HLEHSLSLTL SHFPPLAGRL STSEDGHVFL SCNDAGADIV
101: FAEAKSVRVS DVITGVDVPG VVKEFFSYDR AVSYEGHNRP ILAVQMTELN DGVFIGCSVN HAVVDGTSLW NFVNTFAEVS RGAENATRQP DFTRENVLIS
201: PAVLKVPRGG PKVTFDENAP LRERIFSFTR EQILELKAMV NGERNGVEVL LGSNDAVSKT GSKLEISSFQ SLCALLWRAI TRARNLPSAK TTTFRMAVNV
301: RHRLSPKLNP DYFGNAIQSV PTFAAAGEVL SRDIRWTAGQ LNQSVAAHGD ERIREVVADW EENPRCFPLG NADGASVTMG SSPRFPMYEN DFGWGKPVAV
401: RSGRANKFDG KISAFPGRDG NGSVDLEVIL APETMAGIEC DGEFMRYVSK V
Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)
001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK
Arabidopsis Description
At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.