CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04024	Canola	cytosol	46.26	42.77
CDX83119	Canola	cytosol	40.14	32.6
CDX77413	Canola	cytosol, plastid	66.67	30.62
CDX83118	Canola	mitochondrion, plastid	83.67	27.39
CDX74540	Canola	cytosol	58.5	21.23
CDY39539	Canola	cytosol, plastid	64.63	21.02
CDY01691	Canola	plastid	61.22	20.59
CDY32573	Canola	cytosol	50.34	19.89
CDY14026	Canola	cytosol	31.97	18.36
CDY01434	Canola	cytosol	53.06	17.53
CDX81339	Canola	cytosol	51.02	16.59
CDY40431	Canola	cytosol	50.34	16.44
CDY47454	Canola	cytosol	51.02	16.38
CDY07540	Canola	cytosol	48.98	16.14
CDY01433	Canola	cytosol	47.62	16.02
CDY18638	Canola	cytosol	48.98	15.93
CDY18724	Canola	cytosol	46.26	15.93
CDX74510	Canola	cytosol	48.3	15.85
CDY12811	Canola	extracellular	50.34	15.64
CDY40772	Canola	cytosol, nucleus, plastid	36.73	13.08
CDY14027	Canola	cytosol, nucleus, plastid	34.01	12.17
CDY21238	Canola	cytosol	36.05	11.8
CDY02424	Canola	cytosol	36.05	11.8
CDX71519	Canola	cytosol, nucleus, plastid	35.37	11.58
CDX81073	Canola	cytosol	35.37	11.28
CDX81074	Canola	plastid	34.69	11.09
CDY24938	Canola	cytosol, plastid	32.65	10.46
CDX93218	Canola	peroxisome	31.97	10.42
CDX78313	Canola	cytosol	33.33	10.4
CDY07045	Canola	peroxisome	31.29	10.22
CDY40314	Canola	cytosol	31.29	10.09
CDX74815	Canola	cytosol, plastid	29.25	9.91
CDY40771	Canola	cytosol	31.29	9.48
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	29.93	8.71
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	29.93	8.66
CDX80398	Canola	cytosol	25.85	8.19
CDY44265	Canola	cytosol	25.85	8.09
CDX88059	Canola	cytosol	25.17	7.87
CDY47247	Canola	plasma membrane	8.84	3.52
CDY30596	Canola	extracellular	4.08	2.24
CDY14025	Canola	extracellular	2.04	1.97
CDY12812	Canola	cytosol	2.72	1.38
Bra005957.1-P	Field mustard	plastid	1.36	1.05
CDY17759	Canola	cytosol	0.0	0.0
CDX97348	Canola	cytosol	0.0	0.0
CDY61372	Canola	cytosol	0.0	0.0
CDY66079	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX68582	EnsemblPlantsGene:GSBRNA2T00126175001	Gene3D:3.30.559.10	GO:A0A078BWJ1	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PFAM:PF02458	ProteinID:CDX68582	ProteinID:CDX68582.1	UniParc:UPI0004EABCA5	MapMan:35.1	:

Description

BnaC01g26600D

Coordinates

chrLK031788:+:4463667..4464110

Molecular Weight (calculated)

16581.9 Da

IEP (calculated)

6.930

GRAVY (calculated)

-0.105

Length

147 amino acids

Sequence
(BLAST)

001: MISSSTVRPL TTTRSVLTKV HLTPFDLSLL QLDYPQRGLF FPKPNPDFHL ISRLKASLSL ALEIYFPFAG RLAKVENLED NTVSLFVDCD GSRARFHYAE
101: AKTISVSDLL QPDGSVPDFI KQFFPADDFK NCDGVTEPLL QSFHKCR

Best Arabidopsis Sequence Match ( AT3G50270.1 )
(BLAST)

001: MAGGGVVLVS SSIVRPVNSS QSGRTKIHLT PFDLSLLQFD YPQRGLLFSK PDSDFHLIIS RLKDSLSLAL EIYFPFAGRL VKTENLEDDT VSFFIDCDGS
101: GARFLHTEAK SVSVSDILQP DGSVPDFLKY FFPADDFKSC DGVSLPLLVI QVTEMKDGVF ISFCYNHMVA DGVSMWSFFD TWSKICSTGS CFNYKPLVLK
201: GWFLEGIDYP IHVPVSEAER SPPSREPSSV PITKEWIFHF TKKNISDLKA KANSEIASSS DLEVSSLQAV SAHMWRSIIR HSGVSREQKT HCRLVVDLRQ
301: RVNPPLEKDC FGNMVYLSSA ITTVEELLDR GLGEAALQIR KLVSSQTNET CKSFAEDWVR NIKNLNSGIG SKVGNTIVIA SSPRFEVYNK DFGWGKPIAI
401: RAGPSNSING KLSVFQGISE GSIDVQAILW GDVIVKLLAD LEFLEHVTIA

Arabidopsis Description

Anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SNE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.