CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04024	Canola	cytosol	27.33	77.36
CDY07540	Canola	cytosol	76.0	76.68
CDY47454	Canola	cytosol	78.0	76.64
CDY18724	Canola	cytosol	70.0	73.77
CDX74510	Canola	cytosol	69.78	70.09
CDY32573	Canola	cytosol	55.56	67.2
CDY01434	Canola	cytosol	64.67	65.39
CDY47247	Canola	plasma membrane	51.33	62.6
CDY12811	Canola	extracellular	64.44	61.31
CDX77413	Canola	cytosol, plastid	38.89	54.69
CDY39539	Canola	cytosol, plastid	51.56	51.33
CDY17759	Canola	cytosol	9.11	51.25
CDX68582	Canola	mitochondrion	16.44	50.34
CDX83118	Canola	mitochondrion, plastid	50.0	50.11
CDY30596	Canola	extracellular	29.56	49.63
CDX83119	Canola	cytosol	19.78	49.17
CDY01691	Canola	plastid	47.33	48.74
CDY01433	Canola	cytosol	46.0	47.37
CDY18638	Canola	cytosol	47.56	47.35
CDX81339	Canola	cytosol	47.33	47.12
CDX74540	Canola	cytosol	41.11	45.68
CDY12812	Canola	cytosol	28.22	43.94
CDY21238	Canola	cytosol	33.33	33.41
CDY02424	Canola	cytosol	33.11	33.18
CDY40314	Canola	cytosol	32.22	31.8
CDY40772	Canola	cytosol, nucleus, plastid	29.11	31.72
CDY14027	Canola	cytosol, nucleus, plastid	28.89	31.63
CDX71519	Canola	cytosol, nucleus, plastid	31.56	31.63
CDY14025	Canola	extracellular	10.67	31.58
CDY07045	Canola	peroxisome	30.89	30.89
CDX74815	Canola	cytosol, plastid	29.78	30.88
CDX81074	Canola	plastid	31.11	30.43
CDX93218	Canola	peroxisome	30.44	30.38
CDY24938	Canola	cytosol, plastid	30.44	29.85
CDX78313	Canola	cytosol	31.11	29.72
CDX81073	Canola	cytosol	30.44	29.72
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	32.0	28.51
CDX80398	Canola	cytosol	29.33	28.45
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	31.56	27.95
CDX88059	Canola	cytosol	29.11	27.87
CDY14026	Canola	cytosol	15.78	27.73
CDY40771	Canola	cytosol	29.78	27.63
CDY44265	Canola	cytosol	28.67	27.45
CDX97348	Canola	cytosol	10.44	19.75
CDY61372	Canola	cytosol	10.22	19.01
CDY66079	Canola	cytosol	4.89	12.09

Protein Annotations

EnsemblPlants:CDY40431	EnsemblPlantsGene:GSBRNA2T00069644001	Gene3D:3.30.559.10	GO:A0A078HRT5	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PFAM:PF02458	ProteinID:CDY40431	ProteinID:CDY40431.1	SEG:seg	UniParc:UPI0004EE9D82	UniProt:A0A078HRT5
MapMan:50.2.3	:	:	:	:	:

Description

BnaA04g20860DBnaA04g20860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRT5]

Coordinates

chrLK032470:+:130977..133260

Molecular Weight (calculated)

49546.9 Da

IEP (calculated)

6.277

GRAVY (calculated)

-0.114

Length

450 amino acids

Sequence
(BLAST)

001: MVDIVVISDT IVRPESYEDG SDRAKTIHLT PWDLSFLRTE YAQRALIFPK PDPETHMISQ LKSSLSAALK IFYPYAGRLV KTHNEDDETA SFFIDCDGSG
101: VRFVHAAAVT VSVSDVLRPD NDYWSEFFPA NGVKSWEGVS KPLLAFQVTE LKDGVIIGFG YNHLVTDGAS VWSFFKTWTE IFSTGRKEFP PLSLCGWFLG
201: GIGYPVRVPI SETVPSPSPS HGLVAASTLQ KKIFRFTSRH VSELKAKANG EVGGSDNVSS FQAVLGHTWR SIIRNSGLGP EEVIHCKLAM DIRQRLNPPV
301: EKECFGNMVG LATTTTTAGD MVGNGLGWAA LQINKTVGAQ TNEELRRFAE DWVKDPKIPN RLNIHYFETD GVLFCPSLSP RFDVFGNDFG WGKPIAVRGG
401: PGIAGHGKIL AYPGTEKGST EIHTSLWSHV LDKLLADEEF LQHVDVVVCV

Best Arabidopsis Sequence Match ( AT3G50270.1 )
(BLAST)

001: MAGGGVVLVS SSIVRPVNSS QSGRTKIHLT PFDLSLLQFD YPQRGLLFSK PDSDFHLIIS RLKDSLSLAL EIYFPFAGRL VKTENLEDDT VSFFIDCDGS
101: GARFLHTEAK SVSVSDILQP DGSVPDFLKY FFPADDFKSC DGVSLPLLVI QVTEMKDGVF ISFCYNHMVA DGVSMWSFFD TWSKICSTGS CFNYKPLVLK
201: GWFLEGIDYP IHVPVSEAER SPPSREPSSV PITKEWIFHF TKKNISDLKA KANSEIASSS DLEVSSLQAV SAHMWRSIIR HSGVSREQKT HCRLVVDLRQ
301: RVNPPLEKDC FGNMVYLSSA ITTVEELLDR GLGEAALQIR KLVSSQTNET CKSFAEDWVR NIKNLNSGIG SKVGNTIVIA SSPRFEVYNK DFGWGKPIAI
401: RAGPSNSING KLSVFQGISE GSIDVQAILW GDVIVKLLAD LEFLEHVTIA

Arabidopsis Description

Anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SNE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.