Skip to main content
crop-pal logo
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77413 Canola cytosol, plastid 66.59 94.06
Bra015058.1-P Field mustard cytosol, plastid 94.03 94.03
AT3G50290.1 Thale cress cytosol 46.24 76.56
CDY17759 Canola cytosol 11.5 65.0
CDX68582 Canola mitochondrion 21.02 64.63
CDX83118 Canola mitochondrion, plastid 62.61 63.03
CDX83119 Canola cytosol 25.22 62.98
CDY01691 Canola plastid 59.07 61.1
CDY30596 Canola extracellular 35.84 60.45
CDX74540 Canola cytosol 51.11 57.04
CDY01434 Canola cytosol 55.97 56.85
CDY04024 Canola cytosol 19.91 56.6
CDY32573 Canola cytosol 45.35 55.11
CDY07540 Canola cytosol 52.88 53.59
CDY12812 Canola cytosol 34.07 53.29
CDY12811 Canola extracellular 55.09 52.64
CDY01433 Canola cytosol 50.88 52.63
CDY18724 Canola cytosol 49.12 51.99
CDY40431 Canola cytosol 51.33 51.56
CDX81339 Canola cytosol 51.55 51.55
CDY47454 Canola cytosol 51.99 51.31
CDX74510 Canola cytosol 50.66 51.12
CDY18638 Canola cytosol 51.11 51.11
CDY47247 Canola plasma membrane 37.39 45.8
CDY40772 Canola cytosol, nucleus, plastid 32.08 35.11
CDY14027 Canola cytosol, nucleus, plastid 31.64 34.79
CDY14025 Canola extracellular 11.5 34.21
CDY02424 Canola cytosol 32.96 33.18
CDX71519 Canola cytosol, nucleus, plastid 32.96 33.18
CDY21238 Canola cytosol 32.74 32.96
CDX81073 Canola cytosol 33.41 32.75
CDX74815 Canola cytosol, plastid 30.53 31.8
CDX78313 Canola cytosol 32.74 31.42
CDY40314 Canola cytosol 31.64 31.36
CDX81074 Canola plastid 31.86 31.3
CDY07045 Canola peroxisome 30.97 31.11
CDY14026 Canola cytosol 17.48 30.86
CDX93218 Canola peroxisome 30.75 30.82
CDY40771 Canola cytosol 32.08 29.9
CDY24938 Canola cytosol, plastid 30.31 29.85
CDY48117 Canola endoplasmic reticulum, nucleus, peroxisome 31.19 27.92
CDY55902 Canola endoplasmic reticulum, nucleus, peroxisome 31.19 27.76
CDX80398 Canola cytosol 26.77 26.08
CDX88059 Canola cytosol 26.55 25.53
CDY44265 Canola cytosol 26.33 25.32
CDX97348 Canola cytosol 9.07 17.23
CDY61372 Canola cytosol 8.85 16.53
CDY66079 Canola cytosol 3.98 9.89
Protein Annotations
EnsemblPlants:CDY39539EnsemblPlantsGene:GSBRNA2T00068073001Gene3D:3.30.559.10GO:A0A078HQD3GO:GO:0003674GO:GO:0003824
GO:GO:0016740GO:GO:0016747InterPro:CAT-like_dom_sfInterPro:IPR023213InterPro:TransferasePANTHER:PTHR31896
PANTHER:PTHR31896:SF12PFAM:PF02458ProteinID:CDY39539ProteinID:CDY39539.1UniParc:UPI0004EDFBA7UniProt:A0A078HQD3
MapMan:35.1:::::
Description
BnaC07g07070DBnaC07g07070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HQD3]
Coordinates
chrLK032451:-:20663..22021
Molecular Weight (calculated)
50510.3 Da
IEP (calculated)
7.421
GRAVY (calculated)
-0.186
Length
452 amino acids
Sequence
(BLAST)
001: MADVTVISSS IVRPQNLNQS CRTKIHLTPF DLKLLYVDYP QRGLLFHKPD PETHLISRLK TSLSTALDIY FPFSGRLVKE ENLEDNTVSF YIDCDEHGSS
101: GAKFVHAESK SLSVSDILQL HGSVPDFMSH FFPSVDVKSI NGLTEPLLAL QVTEVKDGVF ISFGYNHMVA DGASIWSFFN IWSKICSDDS DNQKNHNPLK
201: LRGWFLDGIS FPIRVPASET AVPSPRQETS LRPTSNERVF HFTKRNLSNL KAKANNEAGS SDLVISSLQA LSAHLWRSTV RHSGMSRDEE THCKLTVDMR
301: QRLNPPLEKE CFGNLILLGV ATVTVRELLD NQMGWAALQI SKMVRSQTDE KFKTFAKNWV RDVKILEKGC GSPKVFDSVV MSSSPWFDVY GNDFGWGKPI
401: AARAGPGNSM RAKLVLFQGF KEGSIDVHAT LCSHVLVKLL ADVEFLENVT IT
Best Arabidopsis Sequence Match ( AT3G50280.1 )
(BLAST)
001: MADVTFISSS IVRPQIINQE GREKIHLTPF DLNLLYVDYT QRGLLFPKPD PETHFISRLR TSLSSALDIY FPFAGRLNKV ENHEDETVSF YINCDGSGAK
101: FIHAVSDSVS VSDLLRPDGS VPDFFRIFYP MNGVKSIDGL SEPLLALQVT EMRDGVFIGF GYNHMVADGA SIWNFFRTWS KICSNGQREN LQPLALKGLF
201: VDGMDFPIHI PVSDTETSPP SRELSPTFKE RVFHFTKRNI SDLKAKVNGE IGLRDHKVSS LQAVSAHMWR SIIRHSGLNQ EEKTRCFVAV DLRQRLNPPL
301: DKECFGHVIY NSVVTTTVGE LHDQGLGWAF LQINNMLRSL TNEDYRIYAE NWVRNMKIQK SGLGSKMTRD SVIVSSSPRF EVYDNDFGWG KPIAVRAGPS
401: NSISGKLVFF RGIEEGCIDV HAFLLPDVLV KLLADVEFLE KCG
Arabidopsis Description
Uncharacterized acetyltransferase At3g50280 [Source:UniProtKB/Swiss-Prot;Acc:Q9SND9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.