CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G38130.1	Thale cress	cytosol, plasma membrane	75.51	71.43
CDX74540	Canola	cytosol	61.1	65.93
CDX77413	Canola	cytosol, plastid	45.08	61.56
CDX68582	Canola	mitochondrion	20.59	61.22
CDX83119	Canola	cytosol	24.71	59.67
CDY39539	Canola	cytosol, plastid	61.1	59.07
CDX83118	Canola	mitochondrion, plastid	60.41	58.8
CDY30596	Canola	extracellular	33.18	54.1
CDY04024	Canola	cytosol	19.68	54.09
CDY32573	Canola	cytosol	45.77	53.76
CDY01434	Canola	cytosol	54.0	53.03
CDY07540	Canola	cytosol	52.86	51.79
CDY47454	Canola	cytosol	52.86	50.44
CDY12811	Canola	extracellular	54.0	49.89
CDY18724	Canola	cytosol	48.28	49.41
CDX74510	Canola	cytosol	50.11	48.88
CDY12812	Canola	cytosol	31.58	47.75
CDY17759	Canola	cytosol	8.7	47.5
CDY40431	Canola	cytosol	48.74	47.33
CDY01433	Canola	cytosol	46.91	46.91
CDY18638	Canola	cytosol	47.14	45.58
CDX81339	Canola	cytosol	46.68	45.13
CDY47247	Canola	plasma membrane	36.38	43.09
CDY40772	Canola	cytosol, nucleus, plastid	31.81	33.66
CDY14027	Canola	cytosol, nucleus, plastid	30.89	32.85
CDY21238	Canola	cytosol	33.18	32.29
CDY02424	Canola	cytosol	32.95	32.07
CDX71519	Canola	cytosol, nucleus, plastid	32.27	31.4
CDX81073	Canola	cytosol	32.27	30.59
CDX81074	Canola	plastid	32.04	30.43
CDY14026	Canola	cytosol	17.62	30.08
CDX78313	Canola	cytosol	32.27	29.94
CDY40314	Canola	cytosol	30.89	29.61
CDX74815	Canola	cytosol, plastid	29.29	29.49
CDY07045	Canola	peroxisome	29.29	28.44
CDX93218	Canola	peroxisome	29.29	28.38
CDY24938	Canola	cytosol, plastid	29.75	28.32
CDY40771	Canola	cytosol	30.21	27.22
CDY14025	Canola	extracellular	9.38	26.97
CDX80398	Canola	cytosol	28.6	26.94
CDY44265	Canola	cytosol	28.83	26.81
CDX88059	Canola	cytosol	28.38	26.38
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	29.98	25.94
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	29.98	25.79
CDX97348	Canola	cytosol	8.01	14.71
CDY61372	Canola	cytosol	7.78	14.05
CDY66079	Canola	cytosol	3.43	8.24

Protein Annotations

Gene3D:3.30.559.10	MapMan:50.2.3	GO:A0A078EKL3	InterPro:CAT-like_dom_sf	EnsemblPlants:CDY01691	ProteinID:CDY01691
ProteinID:CDY01691.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0016740	GO:GO:0016747	EnsemblPlantsGene:GSBRNA2T00112772001	InterPro:IPR023213
PFAM:PF02458	PANTHER:PTHR31896	PANTHER:PTHR31896:SF12	InterPro:Transferase	UniParc:UPI0004EE192F	SEG:seg

Description

BnaC04g30610D

Coordinates

chrLK031928:+:483516..484829

Molecular Weight (calculated)

48517.1 Da

IEP (calculated)

7.436

GRAVY (calculated)

-0.087

Length

437 amino acids

Sequence
(BLAST)

001: MVEVTVISSS TVRPKNIHKS GRTKIHLTPH DLDLLYLVYP QRGLLFPKPD PNSHVIPRLK AALSTALDIY FPFAGRLVKV NNPEDNTVSF YINCNGSGAK
101: FIHAKAESVS VNDLLESHGS VPCFIDLFFP ANDVESHDAL ISEPLLAVQV TEMKDGVFIS YGYNHMVADG SSFWSFFHSW SRICQTGSGS NFQPLVLKDW
201: FLDKIDYPIH IPVSEMETPP NCETSTKERV FHFTRKKITY LKAKANEEIG SVDSKISSLQ AVVAYLWLSI MRHSGLNREE LTQCKIAADM RRRLDPPLKK
301: ECFGNVTALA VATTNVGDLL DHGVGWTALQ ISKTVRSQTN ISYKTFAENW VKNVKIPKIG VGSRLADRSL IVAGSPWFEV YDHDFGWGKP IAARAGPGNG
401: IGGLLVMFRG VEEGSIDVHA TLTSSLWSDV LMNLFSE

Best Arabidopsis Sequence Match ( AT5G38130.1 )
(BLAST)

001: MPFDLFLSYK VFHLLFYRRK MVEVTVISST MVRPENINQT GRQKIHLTPH DLDLLYLFYP QRGLLFHKPD PENSIIPRLM ASLSTALEIY FPFAGRLVKV
101: NNHEDDTVSF YIDCDGLGAK FVHAKAESIT VNDVLQSHGS VPYFISKFFP ANNVQSRDAL VSEPLLALQV TEMKDGVFIS FGYNHMVADG TCFWKFFHTW
201: SKICLNGSDP SIQSIVLKDW FCDGIDYPVH VPVLEMETLP RWEPSTKERV FHLSKKNILD LKAKANNEID TNDLKISSLQ AVVAYLWLSI IRHSGLNREE
301: ETQCNVAADM RPRLNPLLKK ECFGNVTNLA TATTTVGELL DHGLGWTALQ ISKSVRSETN ESYEVFAKNW VRNVKRPKTS FGSRLANNSL IISSSPRFEV
401: YEHDFGWGKP IAARAGPADG AGGMLVMFRG VEEGSIDVHA TLNSSLWSDV LVNLLTNDMV GQ

Arabidopsis Description

At5g38130 [Source:UniProtKB/TrEMBL;Acc:Q6DBD5]
SUBAcon: [plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.