Factsheet for AT5G38130.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

endoplasmic reticulum 3
golgi 3
extracellular 3
mitochondrion 2
cytosol 2
vacuole 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01691	Canola	plastid	71.43	75.51
AT3G50300.1	Thale cress	cytosol	60.82	62.72
AT3G50280.1	Thale cress	cytosol	58.66	61.17
AT3G50290.1	Thale cress	cytosol	35.93	60.81
AT3G50270.1	Thale cress	plastid	56.93	58.44
AT5G67150.1	Thale cress	cytosol	51.52	53.12
AT5G67160.1	Thale cress	cytosol	46.97	50.0
AT5G07860.1	Thale cress	cytosol	31.17	31.72
AT5G07850.1	Thale cress	cytosol	31.17	31.58
AT5G42830.1	Thale cress	cytosol	30.52	31.33
AT5G07870.1	Thale cress	cytosol	31.17	31.03
AT2G39980.1	Thale cress	cytosol, plastid	29.0	27.8
AT5G01210.1	Thale cress	cytosol	28.36	27.58
AT5G23940.1	Thale cress	mitochondrion	25.76	24.59

Protein Annotations

Gene3D:3.30.559.10	MapMan:35.1	EntrezGene:833793	ProteinID:AED94271.1	ArrayExpress:AT5G38130	EnsemblPlantsGene:AT5G38130
RefSeq:AT5G38130	TAIR:AT5G38130	RefSeq:AT5G38130-TAIR-G	EnsemblPlants:AT5G38130.1	TAIR:AT5G38130.1	Unigene:At.49771
Unigene:At.74245	EMBL:BT015087	EMBL:BT015901	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0016740
GO:GO:0016747	InterPro:IPR023213	RefSeq:NP_198629.2	PFAM:PF02458	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009009
PO:PO:0009010	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009052	PO:PO:0025022	PO:PO:0025281	PANTHER:PTHR31896	PANTHER:PTHR31896:SF12	UniProt:Q6DBD5
InterPro:Transferase	UniParc:UPI000034F298	SEG:seg	:	:	:

Description

At5g38130 [Source:UniProtKB/TrEMBL;Acc:Q6DBD5]

Coordinates

chr5:-:15217819..15219372

Molecular Weight (calculated)

52097.5 Da

IEP (calculated)

6.794

GRAVY (calculated)

-0.123

Length

462 amino acids

Sequence
(BLAST)

001: MPFDLFLSYK VFHLLFYRRK MVEVTVISST MVRPENINQT GRQKIHLTPH DLDLLYLFYP QRGLLFHKPD PENSIIPRLM ASLSTALEIY FPFAGRLVKV
101: NNHEDDTVSF YIDCDGLGAK FVHAKAESIT VNDVLQSHGS VPYFISKFFP ANNVQSRDAL VSEPLLALQV TEMKDGVFIS FGYNHMVADG TCFWKFFHTW
201: SKICLNGSDP SIQSIVLKDW FCDGIDYPVH VPVLEMETLP RWEPSTKERV FHLSKKNILD LKAKANNEID TNDLKISSLQ AVVAYLWLSI IRHSGLNREE
301: ETQCNVAADM RPRLNPLLKK ECFGNVTNLA TATTTVGELL DHGLGWTALQ ISKSVRSETN ESYEVFAKNW VRNVKRPKTS FGSRLANNSL IISSSPRFEV
401: YEHDFGWGKP IAARAGPADG AGGMLVMFRG VEEGSIDVHA TLNSSLWSDV LVNLLTNDMV GQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.