Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009716.1-P | Field mustard | cytosol | 84.09 | 88.1 |
| CDX88059 | Canola | cytosol | 84.71 | 87.23 |
| CDX80398 | Canola | cytosol | 83.26 | 86.85 |
| CDY44265 | Canola | cytosol | 84.3 | 86.81 |
| Bra029388.1-P | Field mustard | cytosol | 84.5 | 85.92 |
| KRH08886 | Soybean | cytosol, nucleus | 60.54 | 65.26 |
| PGSC0003DMT400026230 | Potato | cytosol | 53.93 | 64.76 |
| KRH38407 | Soybean | cytosol | 59.71 | 64.51 |
| VIT_16s0050g00830.t01 | Wine grape | cytosol | 59.09 | 64.27 |
| Solyc03g025320.2.1 | Tomato | cytosol, nucleus | 59.09 | 63.27 |
| GSMUA_AchrUn_... | Banana | cytosol | 50.62 | 54.93 |
| Zm00001d031893_P001 | Maize | mitochondrion | 47.11 | 51.35 |
| TraesCS1A01G341300.1 | Wheat | golgi, unclear | 46.69 | 50.56 |
| TraesCS1B01G354000.1 | Wheat | cytosol | 46.49 | 50.45 |
| TraesCS1D01G343400.1 | Wheat | golgi | 46.28 | 50.11 |
| HORVU1Hr1G075900.1 | Barley | cytosol | 46.28 | 49.89 |
| Os08t0562500-01 | Rice | plastid | 45.45 | 49.44 |
| EES14067 | Sorghum | cytosol, peroxisome, plastid | 47.52 | 49.25 |
| VIT_16s0050g00870.t01 | Wine grape | cytosol | 57.85 | 47.22 |
| AT5G42830.1 | Thale cress | cytosol | 30.17 | 32.44 |
| AT5G07870.1 | Thale cress | cytosol | 29.34 | 30.6 |
| AT5G67160.1 | Thale cress | cytosol | 27.27 | 30.41 |
| AT5G07860.1 | Thale cress | cytosol | 28.51 | 30.4 |
| AT5G01210.1 | Thale cress | cytosol | 29.75 | 30.32 |
| AT5G67150.1 | Thale cress | cytosol | 27.89 | 30.13 |
| AT5G07850.1 | Thale cress | cytosol | 27.69 | 29.39 |
| AT3G50290.1 | Thale cress | cytosol | 16.53 | 29.3 |
| AT2G39980.1 | Thale cress | cytosol, plastid | 28.93 | 29.05 |
| AT3G50300.1 | Thale cress | cytosol | 26.24 | 28.35 |
| AT3G50270.1 | Thale cress | plastid | 26.03 | 28.0 |
| AT3G50280.1 | Thale cress | cytosol | 25.62 | 27.99 |
| AT5G38130.1 | Thale cress | cytosol, plasma membrane | 24.59 | 25.76 |
Protein Annotations
| MapMan:21.9.5.3 | Gene3D:3.30.559.10 | EntrezGene:832459 | ProteinID:AED93236.1 | ArrayExpress:AT5G23940 | EnsemblPlantsGene:AT5G23940 |
| RefSeq:AT5G23940 | TAIR:AT5G23940 | RefSeq:AT5G23940-TAIR-G | EnsemblPlants:AT5G23940.1 | TAIR:AT5G23940.1 | EMBL:AY128300 |
| Unigene:At.21523 | ProteinID:BAB10067.1 | EMBL:BT000770 | EMBL:BT001043 | InterPro:CAT-like_dom_sf | Symbol:EMB3009 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 | GO:GO:0009987 |
| GO:GO:0010090 | GO:GO:0010143 | GO:GO:0016043 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 |
| GO:GO:0030154 | GO:GO:0051179 | GO:GO:0090626 | InterPro:IPR023213 | RefSeq:NP_197782.1 | PFAM:PF02458 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000112 | PO:PO:0000282 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006040 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025097 | PO:PO:0025281 |
| PANTHER:PTHR31896 | PANTHER:PTHR31896:SF4 | UniProt:Q9FF86 | InterPro:Transferase | UniParc:UPI0000048B9C | SEG:seg |
Description
DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
Coordinates
chr5:-:8076312..8079866
Molecular Weight (calculated)
53517.3 Da
IEP (calculated)
5.161
GRAVY (calculated)
-0.308
Length
484 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.