Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G07860.1 | Thale cress | cytosol | 84.27 | 86.12 |
| CDX81073 | Canola | cytosol | 73.06 | 73.54 |
| CDX81074 | Canola | plastid | 72.63 | 73.26 |
| CDX78313 | Canola | cytosol | 72.63 | 71.55 |
| Bra028681.1-P | Field mustard | cytosol | 69.61 | 71.15 |
| CDY14026 | Canola | cytosol | 37.93 | 68.75 |
| AT5G07850.1 | Thale cress | cytosol | 65.95 | 67.11 |
| CDY40771 | Canola | cytosol | 68.97 | 65.98 |
| AT5G42830.1 | Thale cress | cytosol | 62.93 | 64.89 |
| VIT_18s0001g10180.t01 | Wine grape | cytosol | 54.96 | 56.17 |
| VIT_18s0001g10230.t01 | Wine grape | cytosol | 39.66 | 55.26 |
| KRH40990 | Soybean | extracellular | 35.78 | 54.43 |
| KRH52019 | Soybean | cytosol | 53.02 | 53.83 |
| KRH52020 | Soybean | cytosol | 52.8 | 53.73 |
| KRH61321 | Soybean | cytosol | 53.23 | 53.7 |
| KRH40991 | Soybean | cytosol | 47.41 | 53.53 |
| VIT_18s0001g10200.t01 | Wine grape | cytosol | 36.21 | 53.0 |
| KRH61316 | Soybean | cytosol | 52.59 | 52.93 |
| KRH61319 | Soybean | cytosol, mitochondrion, nucleus | 53.45 | 52.88 |
| KRH61619 | Soybean | cytosol | 51.94 | 52.39 |
| Solyc04g078660.1.1 | Tomato | cytosol | 49.78 | 51.56 |
| KRH61320 | Soybean | cytosol, plastid | 53.02 | 50.62 |
| KRH61317 | Soybean | vacuole | 43.97 | 50.37 |
| PGSC0003DMT400020526 | Potato | cytosol | 49.35 | 50.33 |
| PGSC0003DMT400084781 | Potato | cytosol | 47.84 | 49.33 |
| KRH61322 | Soybean | cytosol | 32.76 | 48.87 |
| TraesCS7B01G414500.1 | Wheat | cytosol | 8.41 | 42.39 |
| GSMUA_Achr5P06650_001 | Banana | cytosol | 37.72 | 38.21 |
| Os06t0103200-01 | Rice | mitochondrion | 37.93 | 38.18 |
| Os11t0244100-00 | Rice | mitochondrion | 39.01 | 37.87 |
| EER87685 | Sorghum | mitochondrion | 37.5 | 37.74 |
| GSMUA_Achr7P13950_001 | Banana | plastid | 36.85 | 37.42 |
| OQU91799 | Sorghum | mitochondrion | 37.72 | 37.16 |
| TraesCS7D01G003400.1 | Wheat | plastid | 37.5 | 37.02 |
| Os07t0142700-00 | Rice | plastid | 37.72 | 36.84 |
| TraesCS4A01G426400.1 | Wheat | cytosol | 28.02 | 36.72 |
| Zm00001d035865_P001 | Maize | mitochondrion | 37.5 | 36.63 |
| TraesCS7D01G531500.1 | Wheat | mitochondrion | 37.5 | 36.63 |
| TraesCS4A01G495900.1 | Wheat | plastid | 37.28 | 36.5 |
| AT2G39980.1 | Thale cress | cytosol, plastid | 37.72 | 36.31 |
| AT5G67150.1 | Thale cress | cytosol | 34.91 | 36.16 |
| TraesCS7A01G002700.1 | Wheat | plastid | 36.85 | 36.0 |
| TraesCS3B01G146500.1 | Wheat | cytosol, mitochondrion, plastid | 36.21 | 35.82 |
| TraesCS7D01G057300.1 | Wheat | mitochondrion | 36.21 | 35.74 |
| HORVU7Hr1G000970.1 | Barley | plastid | 38.15 | 35.69 |
| TraesCS3D01G128500.1 | Wheat | mitochondrion | 35.99 | 35.61 |
| TraesCS3A01G127300.1 | Wheat | plastid | 35.56 | 35.18 |
| AT5G01210.1 | Thale cress | cytosol | 35.99 | 35.16 |
| TraesCS4A01G401500.1 | Wheat | plastid | 36.21 | 35.15 |
| EER87684 | Sorghum | plastid | 36.85 | 34.69 |
| HORVU3Hr1G023780.1 | Barley | plastid | 35.34 | 33.74 |
| AT5G67160.1 | Thale cress | cytosol | 31.03 | 33.18 |
| AT3G50270.1 | Thale cress | plastid | 32.11 | 33.11 |
| AT3G50290.1 | Thale cress | cytosol | 19.18 | 32.6 |
| AT3G50280.1 | Thale cress | cytosol | 30.82 | 32.28 |
| AT3G50300.1 | Thale cress | cytosol | 30.6 | 31.7 |
| AT5G38130.1 | Thale cress | cytosol, plasma membrane | 31.03 | 31.17 |
| AT5G23940.1 | Thale cress | mitochondrion | 30.6 | 29.34 |
Protein Annotations
| Gene3D:3.30.559.10 | MapMan:35.1 | EntrezGene:830680 | ProteinID:AED91214.1 | ArrayExpress:AT5G07870 | EnsemblPlantsGene:AT5G07870 |
| RefSeq:AT5G07870 | TAIR:AT5G07870 | RefSeq:AT5G07870-TAIR-G | EnsemblPlants:AT5G07870.1 | TAIR:AT5G07870.1 | ProteinID:BAB09951.1 |
| ProteinID:CAB62599.1 | InterPro:CAT-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016747 |
| InterPro:IPR023213 | RefSeq:NP_196404.1 | PFAM:PF02458 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PANTHER:PTHR31896 | PANTHER:PTHR31896:SF6 | UniProt:Q9SD97 | InterPro:Transferase | UniParc:UPI0000048AF2 | SEG:seg |
Description
HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD97]
Coordinates
chr5:+:2513792..2515731
Molecular Weight (calculated)
51740.9 Da
IEP (calculated)
7.904
GRAVY (calculated)
-0.267
Length
464 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSSSEVRI ISKCFVKPKT IPQKWKEPYH FSPTDHIMLS IHYIQKGLLF LKPSFSESVK PKEFMETLLQ KLKDSLAIAL VHFYPLAGRL STLKTDNSRS
101: HSVFVDCNNS PGARFIHAES DLSVSDILGS TYVPLVVQSL FDHHKALNRD GYTMSLLSIK VTELVDGVFI GLSMNHSLGD GSSFWQFFNS LSEIFNSQEE
201: TIGNNNNNNN NALLCLKNPP IIREATGPMY SLPFSEPNES LSQSEPPVLK ERMFHFSSET VRSLKSKANQ ECGTTMISSF QALTALIWRS ITRARKLPND
301: QETTCRFAAG NRSRMNPPLP TNQFGVYISL VKTTTKIGNL LENEFGWIAL KLHQAVTEHT GEKISYEIDQ MLKSPLPLQA YRLSNLNIVH MGSSPRFNKY
401: GSEFGMGKAV AVRSGYGGKY DGKVSAYPGR QGGASIDLEV CLLPEFMEAL ESDQEFMSLV SSST
101: HSVFVDCNNS PGARFIHAES DLSVSDILGS TYVPLVVQSL FDHHKALNRD GYTMSLLSIK VTELVDGVFI GLSMNHSLGD GSSFWQFFNS LSEIFNSQEE
201: TIGNNNNNNN NALLCLKNPP IIREATGPMY SLPFSEPNES LSQSEPPVLK ERMFHFSSET VRSLKSKANQ ECGTTMISSF QALTALIWRS ITRARKLPND
301: QETTCRFAAG NRSRMNPPLP TNQFGVYISL VKTTTKIGNL LENEFGWIAL KLHQAVTEHT GEKISYEIDQ MLKSPLPLQA YRLSNLNIVH MGSSPRFNKY
401: GSEFGMGKAV AVRSGYGGKY DGKVSAYPGR QGGASIDLEV CLLPEFMEAL ESDQEFMSLV SSST
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.