Factsheet for TraesCS3B01G146500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 3
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G128500.1	Wheat	mitochondrion	96.38	96.38
TraesCS3A01G127300.1	Wheat	plastid	95.95	95.95
HORVU3Hr1G023780.1	Barley	plastid	93.82	90.53
OQU91799	Sorghum	mitochondrion	65.67	65.39
Os11t0244100-00	Rice	mitochondrion	65.25	64.02
Os06t0103200-01	Rice	mitochondrion	62.26	63.34
EER87685	Sorghum	mitochondrion	62.05	63.12
Os07t0142700-00	Rice	plastid	63.33	62.53
Zm00001d035865_P001	Maize	mitochondrion	59.06	58.32
EER87684	Sorghum	plastid	60.34	57.4
TraesCS7B01G414500.1	Wheat	cytosol	10.45	53.26
GSMUA_Achr7P13950_001	Banana	plastid	43.5	44.64
GSMUA_Achr5P06650_001	Banana	cytosol	41.15	42.14
KRH40990	Soybean	extracellular	27.08	41.64
TraesCS2B01G055400.1	Wheat	cytosol	31.13	40.44
TraesCS7B01G451000.1	Wheat	cytosol	38.59	40.13
KRH52020	Soybean	cytosol	39.02	40.13
VIT_18s0001g10240.t01	Wine grape	cytosol	11.51	40.0
KRH40991	Soybean	cytosol	34.97	39.9
TraesCS2B01G490200.1	Wheat	mitochondrion	39.66	39.66
VIT_18s0001g10180.t01	Wine grape	cytosol	38.17	39.43
Bra035334.1-P	Field mustard	cytosol	37.74	39.42
CDY02424	Canola	cytosol	37.74	39.42
KRH52019	Soybean	cytosol	38.38	39.39
KRH61321	Soybean	cytosol	38.59	39.35
Bra028682.1-P	Field mustard	cytosol	32.62	39.23
AT5G42830.1	Thale cress	cytosol	37.53	39.11
KRH61316	Soybean	cytosol	38.38	39.05
TraesCS7B01G221000.1	Wheat	cytosol	38.59	39.01
CDY21238	Canola	cytosol	37.31	38.98
KRH61319	Soybean	cytosol, mitochondrion, nucleus	38.59	38.59
CDY14027	Canola	cytosol, nucleus, plastid	33.69	38.44
Solyc04g078660.1.1	Tomato	cytosol	36.67	38.39
TraesCS1B01G052500.1	Wheat	cytosol, plastid	38.17	38.33
TraesCS1B01G373200.1	Wheat	cytosol	36.67	38.31
KRH61317	Soybean	vacuole	33.05	38.27
KRH61322	Soybean	cytosol	25.37	38.26
KRH61619	Soybean	cytosol	37.53	38.26
TraesCS1B01G295900.1	Wheat	cytosol	37.74	38.15
PGSC0003DMT400020526	Potato	cytosol	36.67	37.8
CDY40772	Canola	cytosol, nucleus, plastid	33.26	37.77
AT5G07850.1	Thale cress	cytosol	36.67	37.72
AT5G07860.1	Thale cress	cytosol	36.46	37.67
TraesCS2B01G048600.1	Wheat	cytosol	36.46	37.58
PGSC0003DMT400084781	Potato	cytosol	36.03	37.56
VIT_18s0001g10230.t01	Wine grape	cytosol	26.65	37.54
TraesCS4B01G335900.1	Wheat	cytosol	37.53	37.53
TraesCS4B01G336000.1	Wheat	mitochondrion	36.89	37.45
CDX71519	Canola	cytosol, nucleus, plastid	35.82	37.42
TraesCS1B01G295800.1	Wheat	cytosol	36.67	37.23
TraesCS5B01G519900.1	Wheat	cytosol, mitochondrion	36.25	36.8
TraesCS2B01G048900.1	Wheat	cytosol	37.1	36.79
CDX81073	Canola	cytosol	36.03	36.66
Solyc04g078350.1.1	Tomato	cytosol	12.79	36.36
VIT_18s0001g10200.t01	Wine grape	cytosol	24.52	36.28
TraesCS2B01G586200.1	Wheat	cytosol	35.18	36.26
AT5G07870.1	Thale cress	cytosol	35.82	36.21
KRH61320	Soybean	cytosol, plastid	37.1	35.8
CDX78313	Canola	cytosol	35.61	35.46
CDX81074	Canola	plastid	34.75	35.43
TraesCS2B01G048800.1	Wheat	peroxisome	23.67	35.35
TraesCS2B01G018300.1	Wheat	cytosol	32.62	34.85
Bra028681.1-P	Field mustard	cytosol	33.69	34.8
TraesCS1B01G354000.1	Wheat	cytosol	32.84	34.53
TraesCS2B01G049100.1	Wheat	cytosol	37.31	34.52
TraesCS1B01G287800.1	Wheat	cytosol, plastid	38.38	34.16
TraesCS3B01G399600.1	Wheat	plastid	35.82	34.15
CDY40771	Canola	cytosol	33.69	32.58
CDY14026	Canola	cytosol	15.35	28.12

Protein Annotations

EnsemblPlants:TraesCS3B01G146500.1	EnsemblPlantsGene:TraesCS3B01G146500	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF14
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr3B:-:136448902..136450413

Molecular Weight (calculated)

49498.5 Da

IEP (calculated)

6.122

GRAVY (calculated)

-0.071

Length

469 amino acids

Sequence
(BLAST)

001: MPPPSPVRVV SSRTVKPPAR PRERIPLASW DVSMINANYI QKGLLFPAPP PPFSTGTAVT SHLADALAEA LGGDYYPVAG RFVTDRHRDD SGAVVGCSVS
101: IDCDGQGVEV VHAVADGVAA ADVVPPDADV PSVVEDLFPL NDAINYDGHE LPLFAAQVTE LADGGVFVGF VCNHALADGT AFWNFLKALA EISRARLAPP
201: GAPQSPASSP RPMFERWSPD GGTAAPVVLP CKDLSELIER PARVPLRGRV LHFSAESVAA LKEQAREELL AAGDAAAAAA QTRYQALTSL IWRCITRARR
301: LAPDSETAFR GAANNRGRLR PPLPAEYFGN SLYGVSTEPV RVSELLARGG HGRAAAAVGR AVAANTDASI RARVAAWTAD PVVTVRLTMM GGSPWFDAYG
401: CDFGWGKPTA VRSGRANKND GRTVLYPGRE GGGSVDAEVS LSPEHMAVLE LDDELRAAVS SSRANFVSL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.