Factsheet for TraesCS1B01G354000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G341300.1	Wheat	golgi, unclear	98.65	98.43
TraesCS1D01G343400.1	Wheat	golgi	98.21	97.99
HORVU1Hr1G075900.1	Barley	cytosol	96.64	95.99
Zm00001d031893_P001	Maize	mitochondrion	82.29	82.66
Os08t0562500-01	Rice	plastid	81.17	81.35
EES14067	Sorghum	cytosol, peroxisome, plastid	82.29	78.59
GSMUA_AchrUn_...	Banana	cytosol	66.37	66.37
PGSC0003DMT400026230	Potato	cytosol	47.53	52.61
VIT_16s0050g00830.t01	Wine grape	cytosol	52.02	52.13
KRH08886	Soybean	cytosol, nucleus	51.12	50.78
KRH38407	Soybean	cytosol	50.9	50.67
Solyc03g025320.2.1	Tomato	cytosol, nucleus	51.12	50.44
CDY44265	Canola	cytosol	51.12	48.51
Bra009716.1-P	Field mustard	cytosol	50.0	48.27
Bra029388.1-P	Field mustard	cytosol	51.12	47.9
CDX80398	Canola	cytosol	49.55	47.63
CDX88059	Canola	cytosol	50.0	47.45
AT5G23940.1	Thale cress	mitochondrion	50.45	46.49
TraesCS7B01G414500.1	Wheat	cytosol	8.52	41.3
VIT_16s0050g00870.t01	Wine grape	cytosol	52.02	39.12
TraesCS7B01G221000.1	Wheat	cytosol	34.75	33.41
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	34.53	32.84
TraesCS2B01G490200.1	Wheat	mitochondrion	33.63	31.98
TraesCS2B01G055400.1	Wheat	cytosol	25.78	31.86
TraesCS7B01G451000.1	Wheat	cytosol	31.61	31.26
TraesCS4B01G336000.1	Wheat	mitochondrion	32.29	31.17
TraesCS1B01G052500.1	Wheat	cytosol, plastid	32.51	31.05
TraesCS1B01G295800.1	Wheat	cytosol	31.39	30.3
TraesCS1B01G373200.1	Wheat	cytosol	30.49	30.29
TraesCS4B01G335900.1	Wheat	cytosol	31.61	30.06
TraesCS1B01G295900.1	Wheat	cytosol	31.17	29.96
TraesCS2B01G048900.1	Wheat	cytosol	31.39	29.6
TraesCS2B01G048600.1	Wheat	cytosol	30.04	29.45
TraesCS5B01G519900.1	Wheat	cytosol, mitochondrion	30.27	29.22
TraesCS3B01G399600.1	Wheat	plastid	32.06	29.07
TraesCS2B01G586200.1	Wheat	cytosol	29.37	28.79
TraesCS2B01G018300.1	Wheat	cytosol	28.03	28.47
TraesCS1B01G287800.1	Wheat	cytosol, plastid	33.63	28.46
TraesCS2B01G049100.1	Wheat	cytosol	30.72	27.02
TraesCS2B01G048800.1	Wheat	peroxisome	18.61	26.43

Protein Annotations

MapMan:21.9.5.3	Gene3D:3.30.559.10	InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009987	GO:GO:0010090	GO:GO:0010143	GO:GO:0016043	GO:GO:0016740
GO:GO:0016747	GO:GO:0030154	GO:GO:0051179	GO:GO:0090626	InterPro:IPR023213	PFAM:PF02458
PANTHER:PTHR31896	PANTHER:PTHR31896:SF4	EnsemblPlantsGene:TraesCS1B01G354000	EnsemblPlants:TraesCS1B01G354000.1	InterPro:Transferase	SEG:seg

Description

No Description!

Coordinates

chr1B:+:583983178..583986581

Molecular Weight (calculated)

47470.7 Da

IEP (calculated)

5.476

GRAVY (calculated)

-0.038

Length

446 amino acids

Sequence
(BLAST)

001: MAVDNGDAAM AVAVTGTRTV APAKTKVTLA TFDLPYITFY YNQKLLLYRL PQGAADFQDV TARMADALGD ALAYFYPLAG RIRQEKGDGG ALYVDGEEGA
101: EVVEAAAEGV SVDQLAGEDC GEEAEKLMQQ LIPYTGVMNL EGLHRPLLAV QFTKLKDGLA VGCAFNHAVL DGTATWHFMS SWAELCRGAA APSALPIHNR
201: AMARSVRVGL TLPASAEAHE KTDPNGPKKP LVARVFSFPG PVVARIKTAA NAALPPGAKP FSAFQSLGAH IWRSVSRARE LGPADITVFA VFADCRARLD
301: PPVPATYFGN LIQAVFTGVP AGMLLGGPPE LAAGMLQKAI GEHDAAAVTR RLDEYEAAPK LFHYSDAGPN CVAVGSSPRF RVYDVDFGFG RPERVRSGGN
401: NKFDGMVYLY PGRGGDSGGI DVELALQPEP MQRLEKDEEF LQVAAA

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.