CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031893_P001	Maize	mitochondrion	90.58	95.27
HORVU1Hr1G075900.1	Barley	cytosol	79.44	82.63
TraesCS1D01G343400.1	Wheat	golgi	79.02	82.55
TraesCS1B01G354000.1	Wheat	cytosol	78.59	82.29
TraesCS1A01G341300.1	Wheat	golgi, unclear	78.59	82.1
Os08t0562500-01	Rice	plastid	76.02	79.78
GSMUA_AchrUn_...	Banana	cytosol	63.6	66.59
PGSC0003DMT400026230	Potato	cytosol	45.4	52.61
VIT_16s0050g00830.t01	Wine grape	cytosol	49.04	51.46
KRH08886	Soybean	cytosol, nucleus	48.82	50.78
Solyc03g025320.2.1	Tomato	cytosol, nucleus	48.82	50.44
KRH38407	Soybean	cytosol	48.18	50.22
CDY44265	Canola	cytosol	48.61	48.3
Bra009716.1-P	Field mustard	cytosol	47.75	48.27
CDX80398	Canola	cytosol	47.54	47.84
Bra029388.1-P	Field mustard	cytosol	48.61	47.69
CDX88059	Canola	cytosol	47.97	47.66
AT5G23940.1	Thale cress	mitochondrion	49.25	47.52
VIT_16s0050g00870.t01	Wine grape	cytosol	48.82	38.45
OQU91799	Sorghum	mitochondrion	32.98	32.7
KXG24241	Sorghum	cytosol	31.48	31.75
EES13245	Sorghum	cytosol	32.12	31.71
EER87685	Sorghum	mitochondrion	31.05	31.45
EES19625	Sorghum	plastid	34.26	31.07
EER87684	Sorghum	plastid	32.55	30.83
EES01771	Sorghum	plastid	32.33	30.51
KXG24238	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	30.62	29.48

Protein Annotations

MapMan:21.9.5.3	Gene3D:3.30.559.10	EntrezGene:8057553	UniProt:C5YMV0	InterPro:CAT-like_dom_sf	EnsemblPlants:EES14067
ProteinID:EES14067	ProteinID:EES14067.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009987	GO:GO:0010090	GO:GO:0010143	GO:GO:0016043	GO:GO:0016740	GO:GO:0016747
GO:GO:0030154	GO:GO:0051179	GO:GO:0090626	InterPro:IPR023213	PFAM:PF02458	PANTHER:PTHR31896
PANTHER:PTHR31896:SF4	EnsemblPlantsGene:SORBI_3007G165800	unigene:Sbi.2007	InterPro:Transferase	UniParc:UPI0001A87BBA	RefSeq:XP_002444572.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:60102559..60105535

Molecular Weight (calculated)

49515.9 Da

IEP (calculated)

5.197

GRAVY (calculated)

-0.069

Length

467 amino acids

Sequence
(BLAST)

001: MGVEENGSSP SPADAAAAVT VTGARTVAPA KNRCTLATFD LPYITFYYNQ KLLLYRTTAA PDFLPFPDAV ARMTAALADA LRVFYPLAGR IVVQREEDDD
101: GGGGAGPGAL AVEGDDGAEV FEAEALGVAV DDLAGGDCTD EAEKVMQQLV PYTGVMNLEG LRRPLLAVQF TKLKDGLAVG CAFNHAVLDG TSTWHFMSSW
201: AELCRGAPLS LQPIHDRSLA RSVRVRLDLP ASAEAHEKTD PNGPKKPLVA RVFSFPERTV ARIKAAANAA LPPAAGGSAK PFSTFQALGA HIWRAVSRAR
301: GLGPADITAF AVFADCRARL DPPLPPAYFG NLIQAVFTGV PAGMLLGGPP ELAAGLLQKA IGEHDAAAVT RRLEEYEAAP KLFHYSDAGP NCVAVGSSPR
401: FKVYDVDFGF GRPERVRSGG NNKFDGMVYL YPGRGGDGGI DVELALQPEP MQRLEKDDDF FLRQAAA

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.