CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra009716.1-P	Field mustard	cytosol	97.2	97.62
CDX88059	Canola	cytosol	98.28	97.02
CDY44265	Canola	cytosol	88.15	87.02
AT5G23940.1	Thale cress	mitochondrion	86.85	83.26
KRH08886	Soybean	cytosol, nucleus	62.07	64.14
KRH38407	Soybean	cytosol	61.64	63.84
VIT_16s0050g00830.t01	Wine grape	cytosol	61.21	63.82
PGSC0003DMT400026230	Potato	cytosol	55.39	63.77
Solyc03g025320.2.1	Tomato	cytosol, nucleus	60.78	62.39
GSMUA_AchrUn_...	Banana	cytosol	51.72	53.81
TraesCS1A01G341300.1	Wheat	golgi, unclear	48.06	49.89
Zm00001d031893_P001	Maize	mitochondrion	47.63	49.77
TraesCS1B01G354000.1	Wheat	cytosol	47.63	49.55
HORVU1Hr1G075900.1	Barley	cytosol	47.84	49.44
TraesCS1D01G343400.1	Wheat	golgi	47.41	49.22
Os08t0562500-01	Rice	plastid	46.34	48.31
EES14067	Sorghum	cytosol, peroxisome, plastid	47.84	47.54
VIT_16s0050g00870.t01	Wine grape	cytosol	59.91	46.88
CDY17759	Canola	cytosol	6.68	38.75
CDY02424	Canola	cytosol	31.68	32.74
CDY21238	Canola	cytosol	31.25	32.29
CDY40314	Canola	cytosol	31.25	31.8
CDY40772	Canola	cytosol, nucleus, plastid	28.23	31.72
CDY14027	Canola	cytosol, nucleus, plastid	28.02	31.63
CDX83118	Canola	mitochondrion, plastid	30.6	31.63
CDY07045	Canola	peroxisome	30.6	31.56
CDX93218	Canola	peroxisome	30.17	31.04
CDX71519	Canola	cytosol, nucleus, plastid	29.96	30.96
CDY04024	Canola	cytosol	10.56	30.82
CDY07540	Canola	cytosol	29.31	30.49
CDY14025	Canola	extracellular	9.91	30.26
CDY18724	Canola	cytosol	27.8	30.21
CDX74815	Canola	cytosol, plastid	28.23	30.18
CDY01434	Canola	cytosol	28.88	30.11
CDX81074	Canola	plastid	29.74	30.0
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	32.33	29.7
CDY47247	Canola	plasma membrane	23.49	29.54
CDY24938	Canola	cytosol, plastid	29.09	29.41
CDY40431	Canola	cytosol	28.45	29.33
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	31.9	29.13
CDX81073	Canola	cytosol	28.88	29.07
CDX81339	Canola	cytosol	28.02	28.76
CDX83119	Canola	cytosol	11.21	28.73
CDY01691	Canola	plastid	26.94	28.6
CDX74510	Canola	cytosol	27.59	28.57
CDY12811	Canola	extracellular	29.09	28.54
CDY32573	Canola	cytosol	22.84	28.49
CDX78313	Canola	cytosol	28.66	28.24
CDY47454	Canola	cytosol	27.8	28.17
CDY18638	Canola	cytosol	27.37	28.1
CDY01433	Canola	cytosol	26.29	27.92
CDY14026	Canola	cytosol	15.3	27.73
CDY40771	Canola	cytosol	28.88	27.63
CDY12812	Canola	cytosol	17.03	27.34
CDY30596	Canola	extracellular	15.73	27.24
CDY39539	Canola	cytosol, plastid	26.08	26.77
CDX74540	Canola	cytosol	23.28	26.67
CDX77413	Canola	cytosol, plastid	18.1	26.25
CDX68582	Canola	mitochondrion	8.19	25.85
CDX97348	Canola	cytosol	9.7	18.91
CDY61372	Canola	cytosol	9.48	18.18
CDY66079	Canola	cytosol	3.88	9.89

Protein Annotations

EnsemblPlants:CDX80398	EnsemblPlantsGene:GSBRNA2T00133464001	Gene3D:3.30.559.10	GO:A0A078CZ36	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF4	PFAM:PF02458	ProteinID:CDX80398	ProteinID:CDX80398.1	SEG:seg	UniParc:UPI0004EEB738
MapMan:21.9.5.3	:	:	:	:	:

Description

BnaC07g30460D

Coordinates

chrLK031821:-:221214..223632

Molecular Weight (calculated)

51313.8 Da

IEP (calculated)

5.380

GRAVY (calculated)

-0.309

Length

464 amino acids

Sequence
(BLAST)

001: MKIKITSKTH VKPNKPILGK QQFQLTTFDL PYLAFYYNQK FLLYKFQNPL DLEEPTFQNN VVEKLKDGLS SVLEDFYQLA GKLAKDDEGV FRVEYDADDE
101: EINGVEFSVA EAPDVSVGDL TVEDGTSKLE EFVPYSRISN LEGLSRPLLV IQVTKLKDGL AMGLALNHAV LDGTATWHFM SSWAEICRGA KTISTQPFLD
201: RAKARDTRVK LDLTAPKDPN AGDGAAEPPQ LVEKVFRFSD SAIHTIKSRA NSAIPSDGSK PFSTFQSLTS HIWRHVTLAR GLKPEDITVF TVFADCRRRV
301: DPPMPEEYFG NMIQAIFTGT AAGLLAAHGP EFGASVVQKA IVAHDARVVN ARNEEWEKSP KIFQFKDAGV NCVAVGSSPR FKVYEVDFGW GKPETVRSGS
401: NNRFNGMMYL YQGKAGGISI DVEISLEAHV MEKLEQSKEF LLIEEEDGKS LSNGNGNANG NGLV

Best Arabidopsis Sequence Match ( AT5G23940.1 )
(BLAST)

001: MKIKIMSKTH VKPTKPVLGK KQFHLTTFDL PYLAFYYNQK FLLYKFQNLL DLEEPTFQNE VVENLKDGLG LVLEDFYQLA GKLAKDDEGV FRVEYDAEDS
101: EINGVEFSVA HAADVTVDDL TAEDGTAKFK ELVPYNGILN LEGLSRPLLA VQVTKLKDGL AMGLAFNHAV LDGTSTWHFM SSWAEICRGA QSISTQPFLD
201: RSKARDTRVK LDLTAPKDPN ETSNGEDAAN PTVEPPQLVE KIFRFSDFAV HTIKSRANSV IPSDSSKPFS TFQSLTSHIW RHVTLARGLK PEDITIFTVF
301: ADCRRRVDPP MPEEYFGNLI QAIFTGTAAG LLAAHGPEFG ASVIQKAIAA HDASVIDARN DEWEKSPKIF QFKDAGVNCV AVGSSPRFRV YEVDFGFGKP
401: ETVRSGSNNR FNGMMYLYQG KAGGISIDVE ITLEASVMEK LVKSKEFLLS EEEEEDDGKK LTNGNGHVNG NGNGYVNGNG NGFV

Arabidopsis Description

DCRBAHD acyltransferase DCR [Source:UniProtKB/Swiss-Prot;Acc:Q9FF86]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.