Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18638 | Canola | cytosol | 93.81 | 93.81 |
| CDY12812 | Canola | cytosol | 39.16 | 61.25 |
| CDY01433 | Canola | cytosol | 59.07 | 61.1 |
| CDY04024 | Canola | cytosol | 19.03 | 54.09 |
| CDX77413 | Canola | cytosol, plastid | 37.39 | 52.81 |
| CDY39539 | Canola | cytosol, plastid | 51.55 | 51.55 |
| CDY01434 | Canola | cytosol | 50.66 | 51.46 |
| CDX68582 | Canola | mitochondrion | 16.59 | 51.02 |
| CDY17759 | Canola | cytosol | 8.85 | 50.0 |
| CDY07540 | Canola | cytosol | 48.67 | 49.33 |
| CDX83118 | Canola | mitochondrion, plastid | 48.67 | 49.0 |
| CDY30596 | Canola | extracellular | 28.54 | 48.13 |
| CDY32573 | Canola | cytosol | 39.6 | 48.12 |
| CDY47454 | Canola | cytosol | 48.67 | 48.03 |
| CDY12811 | Canola | extracellular | 50.22 | 47.99 |
| CDY40431 | Canola | cytosol | 47.12 | 47.33 |
| CDX74540 | Canola | cytosol | 42.26 | 47.16 |
| CDX74510 | Canola | cytosol | 46.68 | 47.1 |
| CDY18724 | Canola | cytosol | 44.25 | 46.84 |
| CDY01691 | Canola | plastid | 45.13 | 46.68 |
| CDX83119 | Canola | cytosol | 18.14 | 45.3 |
| CDY47247 | Canola | plasma membrane | 35.4 | 43.36 |
| CDY21238 | Canola | cytosol | 32.96 | 33.18 |
| CDY02424 | Canola | cytosol | 32.96 | 33.18 |
| CDX71519 | Canola | cytosol, nucleus, plastid | 31.86 | 32.07 |
| CDX81074 | Canola | plastid | 30.53 | 30.0 |
| CDX81073 | Canola | cytosol | 30.53 | 29.93 |
| CDY14026 | Canola | cytosol | 16.59 | 29.3 |
| CDY14027 | Canola | cytosol, nucleus, plastid | 26.55 | 29.2 |
| CDY40772 | Canola | cytosol, nucleus, plastid | 26.55 | 29.06 |
| CDX93218 | Canola | peroxisome | 28.98 | 29.05 |
| CDX74815 | Canola | cytosol, plastid | 27.88 | 29.03 |
| CDY07045 | Canola | peroxisome | 28.76 | 28.89 |
| CDX78313 | Canola | cytosol | 29.65 | 28.45 |
| CDY24938 | Canola | cytosol, plastid | 28.54 | 28.1 |
| CDX80398 | Canola | cytosol | 28.76 | 28.02 |
| CDY40314 | Canola | cytosol | 28.1 | 27.85 |
| CDX88059 | Canola | cytosol | 28.54 | 27.45 |
| CDY44265 | Canola | cytosol | 27.88 | 26.81 |
| CDY40771 | Canola | cytosol | 28.76 | 26.8 |
| CDY48117 | Canola | endoplasmic reticulum, nucleus, peroxisome | 28.98 | 25.94 |
| CDY55902 | Canola | endoplasmic reticulum, nucleus, peroxisome | 28.98 | 25.79 |
| CDY14025 | Canola | extracellular | 8.41 | 25.0 |
| CDX97348 | Canola | cytosol | 7.96 | 15.13 |
| CDY61372 | Canola | cytosol | 7.74 | 14.46 |
| CDY66079 | Canola | cytosol | 3.32 | 8.24 |
Protein Annotations
| EnsemblPlants:CDX81339 | EnsemblPlantsGene:GSBRNA2T00134883001 | Gene3D:3.30.559.10 | GO:A0A078CZC7 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016740 | GO:GO:0016747 | InterPro:CAT-like_dom_sf | InterPro:IPR023213 | InterPro:Transferase | PANTHER:PTHR31896 |
| PFAM:PF02458 | ProteinID:CDX81339 | ProteinID:CDX81339.1 | SEG:seg | UniParc:UPI0004EEBF59 | MapMan:50.2.3 |
Description
BnaC09g07500D
Coordinates
chrLK031824:+:1084786..1086144
Molecular Weight (calculated)
49966.0 Da
IEP (calculated)
6.884
GRAVY (calculated)
-0.107
Length
452 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDLVAKSTS IVRPRNIANQ SISDRVKKIN LTPWDLLRLS FCYPQRGLFF HKPDDLDIDT IISKLKTSLS IALHHFYPLA GRLVKEVNEE DNTVSYFISS
101: CDDGSGSGGV KFVHAAAKTI PVSDLVKSGF VDGLLGSFFF PATGIKNYQG VSNPLLMVQV TELKDGIFIS CGYNHTVADG KSIWKFINAW SEICSKGSGS
201: VPMDLYLKGW FLDRIEYPIR ISDPETEQPS NGASTTSNML QEIVFRLTKV NVLKLKAKAN DEAVSNEDGE ISSFQAVLGH IWRSKVKHGG MSREEETHCR
301: VPIDMRQRLN PKLKEDCFGN LVHTGVVTVK VGEMLDHGLG WLAQKVSKVV RSQTDENVKA FGENWVKNVE IPVSICATLL VTSCPRFNVY GNDFGWGKPI
401: GLRSGPPHSN GKLVVVQGVE EGGLEFQACF PCQVVVKLLC DAEFLEYVDI AS
101: CDDGSGSGGV KFVHAAAKTI PVSDLVKSGF VDGLLGSFFF PATGIKNYQG VSNPLLMVQV TELKDGIFIS CGYNHTVADG KSIWKFINAW SEICSKGSGS
201: VPMDLYLKGW FLDRIEYPIR ISDPETEQPS NGASTTSNML QEIVFRLTKV NVLKLKAKAN DEAVSNEDGE ISSFQAVLGH IWRSKVKHGG MSREEETHCR
301: VPIDMRQRLN PKLKEDCFGN LVHTGVVTVK VGEMLDHGLG WLAQKVSKVV RSQTDENVKA FGENWVKNVE IPVSICATLL VTSCPRFNVY GNDFGWGKPI
401: GLRSGPPHSN GKLVVVQGVE EGGLEFQACF PCQVVVKLLC DAEFLEYVDI AS
001: MEEELVVISK SIVNPRSLKK PTSVKKIQLT PWDLSRLRFG YLQRGLLFHK IEVKQLQASL SVALDRFYPL AGRLVKLKND DDTVSFFISC DGSGVEFVHA
101: VAKNIELSDV LELSGSVPGF FASFFPATGI KNYHGVSRSL LMVQVTEMKD GVFIGFGYNS TVADATSIWK FINAWSEICS KDSSGSQTFQ RRLHLKGWFF
201: DEIDYPIHIP DPETKPTSYV TTPTNLQEKM FHVTKENVLK LDAKANDEAD QKISSIQAVL AYIWRSMVKH SGMSREEETH CRLPINMRQR LNPPLEEECF
301: GNVSQTGIAT VTVGELLDHG LGWAAMQINN MELSQTDEKA KAFAENWVKN IKIPVSVGSK DLVVTNSHRF DVYCNDFGWG KPIAARAGPP YLNGRLVVFK
401: GIGEASLDFQ ACLLPQVVEK LVKDAEFNEY VSIV
101: VAKNIELSDV LELSGSVPGF FASFFPATGI KNYHGVSRSL LMVQVTEMKD GVFIGFGYNS TVADATSIWK FINAWSEICS KDSSGSQTFQ RRLHLKGWFF
201: DEIDYPIHIP DPETKPTSYV TTPTNLQEKM FHVTKENVLK LDAKANDEAD QKISSIQAVL AYIWRSMVKH SGMSREEETH CRLPINMRQR LNPPLEEECF
301: GNVSQTGIAT VTVGELLDHG LGWAAMQINN MELSQTDEKA KAFAENWVKN IKIPVSVGSK DLVVTNSHRF DVYCNDFGWG KPIAARAGPP YLNGRLVVFK
401: GIGEASLDFQ ACLLPQVVEK LVKDAEFNEY VSIV
Arabidopsis Description
EPS1Protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH97]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.