CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02424	Canola	cytosol	83.74	83.74
CDY21238	Canola	cytosol	83.52	83.52
AT5G42830.1	Thale cress	cytosol	83.07	82.89
CDY14027	Canola	cytosol, nucleus, plastid	58.8	64.23
CDY40772	Canola	cytosol, nucleus, plastid	58.35	63.44
CDX81073	Canola	cytosol	64.59	62.91
CDX81074	Canola	plastid	63.47	61.96
VIT_18s0001g10180.t01	Wine grape	cytosol	60.13	59.47
CDX78313	Canola	cytosol	62.14	59.24
KRH52020	Soybean	cytosol	59.69	58.77
CDY14025	Canola	extracellular	19.6	57.89
KRH61316	Soybean	cytosol	59.24	57.7
KRH40990	Soybean	extracellular	38.98	57.38
VIT_18s0001g10230.t01	Wine grape	cytosol	41.65	56.16
VIT_18s0001g10200.t01	Wine grape	cytosol	39.42	55.84
KRH61317	Soybean	vacuole	50.11	55.56
CDY14026	Canola	cytosol	31.63	55.47
KRH52019	Soybean	cytosol	56.12	55.14
KRH61322	Soybean	cytosol	38.08	54.98
KRH61619	Soybean	cytosol	56.12	54.78
KRH61319	Soybean	cytosol, mitochondrion, nucleus	57.02	54.58
KRH61321	Soybean	cytosol	55.9	54.57
Solyc04g078660.1.1	Tomato	cytosol	53.9	54.02
KRH40991	Soybean	cytosol	49.22	53.77
KRH61320	Soybean	cytosol, plastid	57.91	53.5
CDY40771	Canola	cytosol	57.68	53.4
PGSC0003DMT400020526	Potato	cytosol	53.23	52.53
PGSC0003DMT400084781	Potato	cytosol	52.56	52.44
TraesCS7B01G414500.1	Wheat	cytosol	8.91	43.48
GSMUA_Achr5P06650_001	Banana	cytosol	43.43	42.58
Os06t0103200-01	Rice	mitochondrion	43.65	42.52
GSMUA_Achr7P13950_001	Banana	plastid	42.98	42.23
Os11t0244100-00	Rice	mitochondrion	44.1	41.42
CDY24938	Canola	cytosol, plastid	41.65	40.74
EER87685	Sorghum	mitochondrion	41.65	40.56
CDX74815	Canola	cytosol, plastid	39.2	40.55
CDX93218	Canola	peroxisome	40.09	39.91
CDY07045	Canola	peroxisome	39.64	39.56
OQU91799	Sorghum	mitochondrion	40.98	39.07
TraesCS4A01G426400.1	Wheat	cytosol	30.73	38.98
Os07t0142700-00	Rice	plastid	41.2	38.95
CDY40314	Canola	cytosol	39.42	38.82
Zm00001d035865_P001	Maize	mitochondrion	40.76	38.53
TraesCS7D01G531500.1	Wheat	mitochondrion	40.76	38.53
TraesCS7D01G003400.1	Wheat	plastid	40.09	38.3
TraesCS4A01G495900.1	Wheat	plastid	40.31	38.19
TraesCS7D01G057300.1	Wheat	mitochondrion	39.64	37.87
HORVU7Hr1G000970.1	Barley	plastid	41.43	37.5
TraesCS7A01G002700.1	Wheat	plastid	39.42	37.26
TraesCS4A01G401500.1	Wheat	plastid	39.2	36.82
EER87684	Sorghum	plastid	40.09	36.51
TraesCS3D01G128500.1	Wheat	mitochondrion	37.64	36.03
TraesCS3A01G127300.1	Wheat	plastid	37.42	35.82
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	37.42	35.82
CDX68582	Canola	mitochondrion	11.58	35.37
CDX77413	Canola	cytosol, plastid	24.94	35.0
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	38.98	34.65
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	38.98	34.45
CDY01434	Canola	cytosol	34.08	34.38
CDX83118	Canola	mitochondrion, plastid	34.08	34.08
HORVU3Hr1G023780.1	Barley	plastid	36.75	33.95
CDY47247	Canola	plasma membrane	27.62	33.6
CDX74510	Canola	cytosol	33.41	33.48
CDY12812	Canola	cytosol	21.38	33.22
CDY07540	Canola	cytosol	32.96	33.18
CDX83119	Canola	cytosol	13.36	33.15
CDY18724	Canola	cytosol	31.4	33.02
CDY12811	Canola	extracellular	34.74	32.98
CDY39539	Canola	cytosol, plastid	33.18	32.96
CDY01691	Canola	plastid	31.4	32.27
CDY32573	Canola	cytosol	26.73	32.26
CDY47454	Canola	cytosol	32.74	32.1
CDY04024	Canola	cytosol	11.36	32.08
CDY18638	Canola	cytosol	32.07	31.86
CDX81339	Canola	cytosol	32.07	31.86
CDY01433	Canola	cytosol	30.73	31.58
CDY40431	Canola	cytosol	31.63	31.56
CDY17759	Canola	cytosol	5.57	31.25
CDY30596	Canola	extracellular	18.26	30.6
CDX74540	Canola	cytosol	27.39	30.37
CDX80398	Canola	cytosol	30.96	29.96
CDX88059	Canola	cytosol	30.73	29.36
CDY44265	Canola	cytosol	29.84	28.51
CDX97348	Canola	cytosol	12.03	22.69
CDY61372	Canola	cytosol	11.58	21.49
CDY66079	Canola	cytosol	6.68	16.48

Protein Annotations

EnsemblPlants:CDX71519	EnsemblPlantsGene:GSBRNA2T00148464001	Gene3D:3.30.559.10	GO:A0A078C5X9	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF6	PFAM:PF02458	ProteinID:CDX71519	ProteinID:CDX71519.1	SEG:seg	UniParc:UPI0004EE0B96
MapMan:50.2.3	:	:	:	:	:

Description

BnaC04g17540D

Coordinates

chrLK031793:+:2183047..2185146

Molecular Weight (calculated)

50541.7 Da

IEP (calculated)

8.201

GRAVY (calculated)

-0.219

Length

449 amino acids

Sequence
(BLAST)

001: MNSSSSVKIV SKCSLKPKTI PEESKQPYYL SPWDYALLSV HYIQKGLLFH KPLYSIYTLL EKLRESLAAT LVHFYPLVGR LSPPKAEKPK SYSVFVDCNN
101: SPGAGFIYAT SDLCVADIAG PTHVPLFVHS FFDHHRAVNH DGHTMSLLSV QVTELQDGIF LGVSMNHTMG DGTSFWNFFN AWSEIFQAQE SNKTESLCLK
201: NPPVLNRYIP QGYGPLYSLP YSHPDEFIRR YKSPLLKERI FCFSSETTRV LKGKVNQMCG TTSISSLQSL TAFIWRCITR ARRLPLEQET SCRLAADNRG
301: RMYPPLPRDY FGNCISALRT AAKAGELLEN DLGWAALKLH QVVAEQTSEK VSQMIDHWLK SPFMYQTDRL FEPMSVMMGS SPRFNKYGCE FGMGKALTLR
401: SGYAHKFDGK VSAYPGREGG GSIDLEVCLA PEFMKALESD EDFMSLVSI

Best Arabidopsis Sequence Match ( AT5G42830.1 )
(BLAST)

001: MDSSSSVKIV SKSFVKPKTL PEESKQPYYL SPWDYAMLSV QYIQKGLLFH KPPLDSIDTL LEKLKDSLAV TLVHFYPLAG RLSSLTTEKP KSYSVFVDCN
101: DSPGAGFIYA TSDLCIKDIV GAKYVPSIVQ SFFDHHKAVN HDGHTMSLLS VQVTELVDGI FIGLSMNHAM GDGTAFWKFF TAWSEIFQGQ ESNQNDDLCL
201: KNPPVLKRYI PEGYGPLFSL PYSHPDEFIR TYESPILKER MFCFSSETIR MLKTRVNQIC GTTSISSFQS LTAVIWRCIT RARRLPLDRE TSCRVAADNR
301: GRMYPPLHKD YFGNCLSALR TAAKAGELLE NDLGFAALKV HQAVAEHTSE KVSQMIDQWL KSPYIYHIDR LFEPMSVMMG SSPRFNKYGC EFGLGKGVTL
401: RSGYAHKFDG KVSAYPGREG GGSIDLEVCL VPEFMEALES DEEFMSLVSL

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMN6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.