CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40991	Soybean	cytosol	86.14	98.3
KRH52020	Soybean	cytosol	78.25	80.48
KRH40990	Soybean	extracellular	51.39	79.02
KRH52019	Soybean	cytosol	76.33	78.34
KRH61321	Soybean	cytosol	76.76	78.26
KRH61316	Soybean	cytosol	74.84	76.14
KRH61619	Soybean	cytosol	74.63	76.09
KRH61320	Soybean	cytosol, plastid	77.19	74.49
KRH61317	Soybean	vacuole	63.11	73.09
KRH61322	Soybean	cytosol	46.27	69.77
VIT_18s0001g10180.t01	Wine grape	cytosol	59.91	61.89
VIT_18s0001g10230.t01	Wine grape	cytosol	42.64	60.06
VIT_18s0001g10200.t01	Wine grape	cytosol	39.45	58.36
Bra028682.1-P	Field mustard	cytosol	48.4	58.21
CDY14027	Canola	cytosol, nucleus, plastid	50.53	57.66
CDX71519	Canola	cytosol, nucleus, plastid	54.58	57.02
CDY40772	Canola	cytosol, nucleus, plastid	49.89	56.66
AT5G42830.1	Thale cress	cytosol	54.16	56.44
CDY02424	Canola	cytosol	53.52	55.9
Bra035334.1-P	Field mustard	cytosol	53.52	55.9
CDY21238	Canola	cytosol	53.3	55.68
Solyc04g078660.1.1	Tomato	cytosol	52.24	54.69
AT5G07860.1	Thale cress	cytosol	52.88	54.63
PGSC0003DMT400084781	Potato	cytosol	52.03	54.22
AT5G07850.1	Thale cress	cytosol	52.45	53.95
PGSC0003DMT400020526	Potato	cytosol	52.03	53.63
CDX81073	Canola	cytosol	52.67	53.58
AT5G07870.1	Thale cress	cytosol	52.88	53.45
CDX81074	Canola	plastid	52.03	53.04
CDX78313	Canola	cytosol	52.45	52.23
Bra028681.1-P	Field mustard	cytosol	47.76	49.34
TraesCS7B01G414500.1	Wheat	cytosol	9.38	47.83
CDY40771	Canola	cytosol	47.55	45.98
GSMUA_Achr7P13950_001	Banana	plastid	44.35	45.51
CDY14026	Canola	cytosol	24.73	45.31
Os06t0103200-01	Rice	mitochondrion	43.5	44.25
GSMUA_Achr5P06650_001	Banana	cytosol	43.07	44.1
Os11t0244100-00	Rice	mitochondrion	42.86	42.05
EER87685	Sorghum	mitochondrion	41.15	41.87
TraesCS4A01G426400.1	Wheat	cytosol	31.34	41.53
HORVU7Hr1G000970.1	Barley	plastid	43.71	41.33
TraesCS7D01G003400.1	Wheat	plastid	41.36	41.28
TraesCS4A01G495900.1	Wheat	plastid	41.58	41.14
TraesCS7A01G002700.1	Wheat	plastid	41.36	40.84
Os07t0142700-00	Rice	plastid	41.36	40.84
TraesCS7D01G057300.1	Wheat	mitochondrion	40.09	40.0
Zm00001d035865_P001	Maize	mitochondrion	40.51	40.0
KRH04296	Soybean	cytosol	37.74	39.95
TraesCS7D01G531500.1	Wheat	mitochondrion	40.3	39.79
OQU91799	Sorghum	mitochondrion	39.87	39.7
TraesCS3D01G128500.1	Wheat	mitochondrion	39.45	39.45
KRH73150	Soybean	cytosol, plastid	39.87	39.12
KRH57913	Soybean	cytosol	36.25	38.99
KRH14988	Soybean	cytosol, plastid	39.66	38.83
TraesCS4A01G401500.1	Wheat	plastid	39.45	38.7
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	38.59	38.59
EER87684	Sorghum	plastid	40.09	38.13
TraesCS3A01G127300.1	Wheat	plastid	37.95	37.95
KRH04581	Soybean	cytosol, endoplasmic reticulum	35.39	37.81
KRH66032	Soybean	cytosol	37.1	37.26
KRH75833	Soybean	cytosol	37.31	36.92
KRH31113	Soybean	plastid	38.59	36.71
KRG97771	Soybean	plastid	36.89	36.58
HORVU3Hr1G023780.1	Barley	plastid	37.53	36.21
KRH08886	Soybean	cytosol, nucleus	28.14	29.4
KRH38407	Soybean	cytosol	27.72	29.02

Protein Annotations

EMBL:ACUP02002161	EnsemblPlants:KRH61319	EnsemblPlantsGene:GLYMA_04G040200	EntrezGene:100789881	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF6	PFAM:PF02458	ProteinID:ABC47846.1	ProteinID:KRH61319	ProteinID:KRH61319.1
UniParc:UPI0000E583B8	UniProt:Q00M86	MapMan:50.2.3	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:3220360..3222738

Molecular Weight (calculated)

52520.4 Da

IEP (calculated)

6.977

GRAVY (calculated)

-0.230

Length

469 amino acids

Sequence
(BLAST)

001: MSAPAVRRIS ECFVKPQLPN QVSNQICNLT HWDIAMLSTN YIQKGLLFKK PATTLVDQHH FMENLLEKLK HSLSLTLFHF YPLAGRLVTH QTHDPPSYSV
101: SVDCKNSDGA RFIYATSDIT ISDILAPIDV PPILHSFFDH HKAVNHDGHT MSLLSIQVTE LVDAVFIGCS MNHVVGDGTS YWNFFNTWSQ IFQSQSHALG
201: HEYDVPIHNR WFPKDCAPPI NLPFIHHDEI ISRYEAPKLR ERIFHFSAES IAKLKAKANS ESNTTKISSF QSLSALVWRS VTRARSPPND QRTTCRLAAN
301: NRSRMEPPLP QEYFGNSVHV VSAETTTGEL LENGIGWAAW KLHMAVANYN NGVVLQSLKV WLESPFVIQM GRFFDPYCVM MGSSPRFNVY GNEFGMGKAV
401: AARSGYANKF EGKVTSYPGR EGGGSIDLEV CLSPENMTAL ESDEEFMNAV SKSNPLYELT NVACPGPSF

Best Arabidopsis Sequence Match ( AT5G07870.1 )
(BLAST)

001: MDSSSSEVRI ISKCFVKPKT IPQKWKEPYH FSPTDHIMLS IHYIQKGLLF LKPSFSESVK PKEFMETLLQ KLKDSLAIAL VHFYPLAGRL STLKTDNSRS
101: HSVFVDCNNS PGARFIHAES DLSVSDILGS TYVPLVVQSL FDHHKALNRD GYTMSLLSIK VTELVDGVFI GLSMNHSLGD GSSFWQFFNS LSEIFNSQEE
201: TIGNNNNNNN NALLCLKNPP IIREATGPMY SLPFSEPNES LSQSEPPVLK ERMFHFSSET VRSLKSKANQ ECGTTMISSF QALTALIWRS ITRARKLPND
301: QETTCRFAAG NRSRMNPPLP TNQFGVYISL VKTTTKIGNL LENEFGWIAL KLHQAVTEHT GEKISYEIDQ MLKSPLPLQA YRLSNLNIVH MGSSPRFNKY
401: GSEFGMGKAV AVRSGYGGKY DGKVSAYPGR QGGASIDLEV CLLPEFMEAL ESDQEFMSLV SSST

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD97]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.