CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH14988	Soybean	cytosol, plastid	91.84	91.65
PGSC0003DMT400069898	Potato	cytosol	68.2	71.33
Solyc05g052680.1.1	Tomato	cytosol, plastid	67.99	71.12
PGSC0003DMT400069897	Potato	plastid	67.78	70.43
PGSC0003DMT400069755	Potato	cytosol, plastid	67.99	70.19
Solyc05g052670.1.1	Tomato	plastid	67.36	69.85
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	70.92	69.61
KRG97771	Soybean	plastid	62.55	63.21
KRH66032	Soybean	cytosol	61.51	62.95
KRH75833	Soybean	cytosol	61.72	62.24
KRH31113	Soybean	plastid	63.39	61.46
GSMUA_Achr10P...	Banana	plastid	49.16	56.09
GSMUA_Achr8P19570_001	Banana	plastid	48.95	55.45
GSMUA_AchrUn_...	Banana	plastid	47.07	54.22
Os01t0854000-01	Rice	plastid	54.6	54.04
Zm00001d042826_P001	Maize	plastid	54.39	53.72
TraesCS3A01G367900.1	Wheat	plastid	54.81	53.14
EES01771	Sorghum	plastid	54.81	52.93
TraesCS3B01G399600.1	Wheat	plastid	54.18	52.64
TraesCS3D01G360900.1	Wheat	plastid	53.97	52.33
Os05t0449200-01	Rice	plastid	51.67	51.46
Zm00001d010079_P001	Maize	plastid	53.14	51.0
Zm00001d012333_P001	Maize	plastid	54.18	50.78
EES19625	Sorghum	plastid	53.97	50.1
HORVU3Hr1G085100.2	Barley	plastid	54.6	48.88
TraesCS1A01G278800.1	Wheat	cytosol, plastid	52.51	47.54
TraesCS1B01G287800.1	Wheat	cytosol, plastid	52.3	47.44
HORVU1Hr1G073330.1	Barley	cytosol	52.51	45.06
TraesCS1D01G278100.1	Wheat	plastid	52.51	43.96
KRH40990	Soybean	extracellular	27.62	43.28
KRH61317	Soybean	vacuole	35.36	41.73
KRH52020	Soybean	cytosol	39.33	41.23
KRH61321	Soybean	cytosol	39.54	41.09
KRH61316	Soybean	cytosol	39.54	41.0
KRH52019	Soybean	cytosol	38.7	40.48
KRH61619	Soybean	cytosol	38.7	40.22
KRH40991	Soybean	cytosol	34.31	39.9
KRH61319	Soybean	cytosol, mitochondrion, nucleus	39.12	39.87
KRH61320	Soybean	cytosol, plastid	39.12	38.48
KRH61322	Soybean	cytosol	24.9	38.26
KRH04296	Soybean	cytosol	33.47	36.12
KRH57913	Soybean	cytosol	32.22	35.32
KRH04581	Soybean	cytosol, endoplasmic reticulum	32.01	34.85
KRH08886	Soybean	cytosol, nucleus	29.08	30.96
KRH38407	Soybean	cytosol	28.66	30.58

Protein Annotations

EMBL:ACUP02001267	EnsemblPlants:KRH73150	EnsemblPlantsGene:GLYMA_02G254600	EntrezGene:100500612	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF11	PFAM:PF02458	ProteinID:KRH73150	ProteinID:KRH73150.1	SEG:seg
UniParc:UPI0002336C0E	UniProt:I1JI60	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:44177619..44179660

Molecular Weight (calculated)

53400.7 Da

IEP (calculated)

8.418

GRAVY (calculated)

-0.227

Length

478 amino acids

Sequence
(BLAST)

001: MPSPVPTLLS KCTVFPDQKS TLGNLKLSVS DLPMLSCHYI QKGCLFTHPN LPLHSLIPLL KSSLSRTLSL FPPLAGRLIT DSDSYVYIAC NDAGVDFIHA
101: NATALRICDL LSQLDVPESF KEFFAFDRKV SYTGHFSPIL AVQVTELADG VFIGCAVNHA VTDGTSFWNF FNTFAQLSRG ASNCIRNIPD FHRESVLISD
201: AVLRLPEGGP QVTFDANAPL RERIFSFSRE AIQKLKAIAN NRRWPENNNF AGELLRKKSN DNLLKENKAT TILENWFKVN SNSISKPQTV EISSFQSVCA
301: LLWRGVTRAR KFPSSKTTTF RMAVNCRHRL EPKLEAYYFG NAIQSVPTYA SAGEVLSRDL RWCAEQLNKN VKAHDDTMVR RFVEDWERNP RCFPLGNPDG
401: ASITMGSSPR FPMYDNNFGW GRPLAVRSGR ANKFDGKISA FPGRDGTGTV DLEVVLAPET MEALESDPEF MKYATCQL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.