Factsheet for TraesCS3A01G367900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G360900.1	Wheat	plastid	97.36	97.36
TraesCS3B01G399600.1	Wheat	plastid	96.35	96.54
HORVU3Hr1G085100.2	Barley	plastid	96.35	88.95
Os01t0854000-01	Rice	plastid	82.35	84.06
EES01771	Sorghum	plastid	83.16	82.83
Zm00001d042826_P001	Maize	plastid	80.32	81.82
Zm00001d012333_P001	Maize	plastid	82.15	79.41
TraesCS1A01G278800.1	Wheat	cytosol, plastid	70.39	65.72
GSMUA_Achr10P...	Banana	plastid	53.96	63.48
GSMUA_Achr8P19570_001	Banana	plastid	53.96	63.03
GSMUA_AchrUn_...	Banana	plastid	48.07	57.11
CDY07045	Canola	peroxisome	51.12	56.0
CDX74815	Canola	cytosol, plastid	49.29	55.99
CDX93218	Canola	peroxisome	50.71	55.43
KRH73150	Soybean	cytosol, plastid	53.14	54.81
Bra009632.1-P	Field mustard	plastid	45.44	54.11
Bra017041.1-P	Field mustard	cytosol	51.52	54.04
CDY40314	Canola	cytosol	49.9	53.95
CDY24938	Canola	cytosol, plastid	49.9	53.59
AT5G01210.1	Thale cress	cytosol	51.52	53.47
KRH14988	Soybean	cytosol, plastid	51.93	53.44
PGSC0003DMT400069898	Potato	cytosol	49.49	53.39
Solyc05g052680.1.1	Tomato	cytosol, plastid	49.49	53.39
PGSC0003DMT400069755	Potato	cytosol, plastid	50.1	53.35
PGSC0003DMT400069897	Potato	plastid	49.7	53.26
Bra004996.1-P	Field mustard	cytosol	51.32	52.82
KRH66032	Soybean	cytosol	49.9	52.68
Bra028893.1-P	Field mustard	cytosol, plastid	51.12	52.61
Solyc05g052670.1.1	Tomato	plastid	49.09	52.49
PGSC0003DMT400052409	Potato	cytosol, plastid	48.88	52.39
AT2G39980.1	Thale cress	cytosol, plastid	51.12	52.28
Solyc09g014280.1.1	Tomato	cytosol, plastid	48.48	51.96
KRH75833	Soybean	cytosol	49.9	51.9
VIT_08s0007g01930.t01	Wine grape	plastid	50.71	50.61
VIT_13s0019g03430.t01	Wine grape	cytosol, peroxisome, plastid	49.9	50.51
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	50.71	49.51
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	50.71	49.21
KRG97771	Soybean	plastid	46.45	48.41
KRH31113	Soybean	plastid	47.06	47.06
TraesCS4A01G426400.1	Wheat	cytosol	27.59	38.42
TraesCS4A01G495900.1	Wheat	plastid	35.7	37.13
TraesCS3A01G127300.1	Wheat	plastid	34.48	36.25
TraesCS4A01G401500.1	Wheat	plastid	35.09	36.19
TraesCS7A01G002700.1	Wheat	plastid	34.69	36.0
TraesCS1A01G286400.1	Wheat	cytosol	32.66	34.7
TraesCS1A01G286500.1	Wheat	cytosol	30.63	34.4
TraesCS3A01G025000.1	Wheat	cytosol	20.08	33.79
TraesCS2A01G467400.1	Wheat	cytosol	32.05	33.69
TraesCS4A01G350100.1	Wheat	cytosol	31.85	33.33
TraesCS2A01G035600.1	Wheat	cytosol	19.27	33.33
TraesCS1A01G008500.1	Wheat	cytosol, plastid	31.44	32.84
TraesCS2A01G042800.1	Wheat	cytosol	31.03	32.76
TraesCS1A01G341300.1	Wheat	golgi, unclear	29.61	32.66
TraesCS1A01G029500.1	Wheat	peroxisome, plastid	30.63	31.99
TraesCS3A01G024800.1	Wheat	cytosol, extracellular, plastid	28.6	31.9
TraesCS2A01G035800.1	Wheat	cytosol	29.82	31.41
TraesCS2A01G006700.1	Wheat	cytosol	27.18	30.95
TraesCS2A01G036200.1	Wheat	cytosol	29.41	28.43
TraesCS2A01G035900.1	Wheat	mitochondrion	30.43	27.99
TraesCS2A01G006200.1	Wheat	cytosol	29.01	27.55

Protein Annotations

EnsemblPlants:TraesCS3A01G367900.1	EnsemblPlantsGene:TraesCS3A01G367900	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896	PANTHER:PTHR31896:SF23
PFAM:PF02458	SEG:seg	SUPFAM:SSF52777	MapMan:50.2.3	:	:

Description

No Description!

Coordinates

chr3A:-:616724939..616726420

Molecular Weight (calculated)

53075.4 Da

IEP (calculated)

7.250

GRAVY (calculated)

0.013

Length

493 amino acids

Sequence
(BLAST)

001: MAQMLSAMTM TMDTVPTAPA IMPAQPICLD APLSGSGIAV LSRQAVHPDG PPSALGDLTL SVSDLPMLSC HYIQKGLFFP APDVPMASLV SLLVSSLSRA
101: LAVFPALAGR FVTLPDDRIV IRCNDAGVEF RHAVAPALSL NDFLVPNADV PTRLTKDLFP MDRTVSYEGH RRPLTSFQLT VLGDGAVFIG IVANHAVVDG
201: TSFWHFYNTW AALCRGASPR LPDFRRNFFG ESTAVLRFAG GVGPAVTFDA DAPLRERIFH FSRDAIRELK AIANRRSSAG QDAEVYGKMA HDPKNQEARG
301: EISSFQSLCA QIWISTTRAR KQLDADATTT LRLAVNCRHR LRPAVSPAYF GNAIQSAPTT ATVAELASND LRWAASRLNA SLAAYGDEAI RGAAAAWQAA
401: PRCFPLGNPD GAVVTMGSSN RFPMYEGNDF GWGRPLAVRS GRANKFDGKM SAFPGRSGDD SVDIEVCLAP DTMAALLRDD EFMQYVSCPA HLL

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.