CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66032	Soybean	cytosol	94.51	95.93
CDY40314	Canola	cytosol	66.24	68.86
Bra009632.1-P	Field mustard	plastid	59.92	68.6
AT5G01210.1	Thale cress	cytosol	68.57	68.42
Bra028893.1-P	Field mustard	cytosol, plastid	68.35	67.64
VIT_08s0007g01930.t01	Wine grape	plastid	70.04	67.21
PGSC0003DMT400052409	Potato	cytosol, plastid	64.35	66.3
Solyc09g014280.1.1	Tomato	cytosol, plastid	63.5	65.43
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	67.09	62.97
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	66.46	62.01
KRH73150	Soybean	cytosol, plastid	62.24	61.72
KRH14988	Soybean	cytosol, plastid	60.76	60.13
GSMUA_Achr10P...	Banana	plastid	47.89	54.18
KRG97771	Soybean	plastid	53.59	53.7
Os01t0854000-01	Rice	plastid	53.38	52.38
GSMUA_Achr8P19570_001	Banana	plastid	46.2	51.9
GSMUA_AchrUn_...	Banana	plastid	44.94	51.33
Zm00001d042826_P001	Maize	plastid	52.32	51.24
EES01771	Sorghum	plastid	53.38	51.11
KRH31113	Soybean	plastid	52.95	50.91
Os05t0449200-01	Rice	plastid	51.27	50.62
TraesCS3A01G367900.1	Wheat	plastid	51.9	49.9
TraesCS3D01G360900.1	Wheat	plastid	51.69	49.7
TraesCS3B01G399600.1	Wheat	plastid	51.48	49.59
Zm00001d012333_P001	Maize	plastid	53.16	49.41
Zm00001d010079_P001	Maize	plastid	51.48	49.0
EES19625	Sorghum	plastid	52.53	48.35
TraesCS1A01G278800.1	Wheat	cytosol, plastid	52.53	47.16
TraesCS1B01G287800.1	Wheat	cytosol, plastid	52.11	46.87
HORVU3Hr1G085100.2	Barley	plastid	51.69	45.88
HORVU1Hr1G073330.1	Barley	cytosol	52.11	44.34
TraesCS1D01G278100.1	Wheat	plastid	52.32	43.43
KRH40990	Soybean	extracellular	27.43	42.62
KRH61316	Soybean	cytosol	38.4	39.48
KRH52020	Soybean	cytosol	37.76	39.25
KRH61317	Soybean	vacuole	33.12	38.77
KRH52019	Soybean	cytosol	37.13	38.51
KRH61321	Soybean	cytosol	37.13	38.26
KRH40991	Soybean	cytosol	32.7	37.71
KRH61619	Soybean	cytosol	36.29	37.39
KRH61319	Soybean	cytosol, mitochondrion, nucleus	36.92	37.31
KRH61320	Soybean	cytosol, plastid	38.19	37.24
KRH04296	Soybean	cytosol	31.86	34.09
KRH57913	Soybean	cytosol	31.01	33.72
KRH61322	Soybean	cytosol	21.94	33.44
KRH04581	Soybean	cytosol, endoplasmic reticulum	30.8	33.26
KRH38407	Soybean	cytosol	30.17	31.92
KRH08886	Soybean	cytosol, nucleus	29.96	31.63

Protein Annotations

EMBL:ACUP02000501	EnsemblPlants:KRH75833	EnsemblPlantsGene:GLYMA_01G112900	EntrezGene:100780358	Gene3D:3.30.559.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase
PANTHER:PTHR31896	PANTHER:PTHR31896:SF5	PFAM:PF02458	ProteinID:KRH75833	ProteinID:KRH75833.1	SEG:seg
SUPFAM:SSF52777	UniParc:UPI00023374D5	UniProt:I1J785	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr1:+:38606406..38608747

Molecular Weight (calculated)

52045.0 Da

IEP (calculated)

7.853

GRAVY (calculated)

-0.166

Length

474 amino acids

Sequence
(BLAST)

001: MPSSSTTIVS KCVIHPDQKS NMKPLRLSVS DLPMLSCHYI QKGVLLTAPP SSFEDMILSF KHSLSIALSH FPALAGRLET DSHGYVNIVC NDAGVDFIHA
101: KAKHLTLNAV VSPSLVDVHP CFKEEFFAYD MTISYAGHNT PLAAVQVTEL ADGVFVGCTV NHSVTDGTSF WHFFNTFAAV TKGGSAKKLL RAPDFTRETV
201: FNSAAVLPVP SGGPTVTFDA NEPLRERVFH FSREAIQKLK QRANNTVNNK ELTEVMGKHV NDGWKVVNGN GNGNCNGMIN GNGRNEISSF QSLSAQLWRA
301: VTRARKFNDP AKTSTFRMAV NCRHRLEPKM DAFYFGNAIQ SIPTVATVGD ILSRDLRFCA DLLHRNVVAH DDATVRRGIE DWESAPRLFP LGNFDGAMIT
401: MGSSPRFPMY ENDFGWGRPV AIRSGKANKF DGKISAFPGR EGNGSVDLEV VLAPATMAGL ENDMEFMQYV TQFV

Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)

001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC

Arabidopsis Description

AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.