CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

cytosol 3
mitochondrion 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH40990	Soybean	extracellular	52.84	70.16
KRH52020	Soybean	cytosol	75.06	66.67
KRH40991	Soybean	cytosol	65.43	64.48
KRH61316	Soybean	cytosol	72.59	63.77
KRH61319	Soybean	cytosol, mitochondrion, nucleus	73.09	63.11
KRH61321	Soybean	cytosol	71.6	63.04
KRH52019	Soybean	cytosol	71.11	63.02
KRH61619	Soybean	cytosol	69.38	61.09
KRH61320	Soybean	cytosol, plastid	72.35	60.29
VIT_18s0001g10200.t01	Wine grape	cytosol	47.16	60.25
KRH61322	Soybean	cytosol	45.93	59.81
VIT_18s0001g10180.t01	Wine grape	cytosol	61.48	54.85
Bra028682.1-P	Field mustard	cytosol	52.35	54.36
VIT_18s0001g10230.t01	Wine grape	cytosol	41.73	50.75
Solyc04g078660.1.1	Tomato	cytosol	55.8	50.45
CDX71519	Canola	cytosol, nucleus, plastid	55.56	50.11
AT5G42830.1	Thale cress	cytosol	55.06	49.56
PGSC0003DMT400020526	Potato	cytosol	55.31	49.23
PGSC0003DMT400084781	Potato	cytosol	54.32	48.89
CDY02424	Canola	cytosol	53.58	48.33
Bra035334.1-P	Field mustard	cytosol	53.58	48.33
CDY21238	Canola	cytosol	53.33	48.11
AT5G07850.1	Thale cress	cytosol	53.58	47.59
CDY40772	Canola	cytosol, nucleus, plastid	48.4	47.46
CDY14027	Canola	cytosol, nucleus, plastid	48.15	47.45
AT5G07860.1	Thale cress	cytosol	51.36	45.81
CDX81074	Canola	plastid	50.62	44.57
AT5G07870.1	Thale cress	cytosol	50.37	43.97
CDX81073	Canola	cytosol	49.88	43.82
CDX78313	Canola	cytosol	49.88	42.89
TraesCS7B01G414500.1	Wheat	cytosol	9.63	42.39
GSMUA_Achr7P13950_001	Banana	plastid	46.91	41.58
GSMUA_Achr5P06650_001	Banana	cytosol	46.67	41.27
TraesCS4A01G426400.1	Wheat	cytosol	35.56	40.68
Bra028681.1-P	Field mustard	cytosol	45.43	40.53
CDY40771	Canola	cytosol	45.19	37.73
CDY14026	Canola	cytosol	22.96	36.33
Os06t0103200-01	Rice	mitochondrion	40.74	35.79
EER87685	Sorghum	mitochondrion	40.74	35.79
KRH04296	Soybean	cytosol	39.01	35.67
KRH73150	Soybean	cytosol, plastid	41.73	35.36
KRH14988	Soybean	cytosol, plastid	40.99	34.66
Os07t0142700-00	Rice	plastid	40.49	34.53
TraesCS7D01G003400.1	Wheat	plastid	40.0	34.47
KRH57913	Soybean	cytosol	37.04	34.4
TraesCS7D01G531500.1	Wheat	mitochondrion	40.25	34.32
Os11t0244100-00	Rice	mitochondrion	40.49	34.31
Zm00001d035865_P001	Maize	mitochondrion	40.0	34.11
OQU91799	Sorghum	mitochondrion	39.51	33.97
HORVU7Hr1G000970.1	Barley	plastid	41.48	33.87
KRH04581	Soybean	cytosol, endoplasmic reticulum	36.54	33.71
TraesCS4A01G495900.1	Wheat	plastid	39.26	33.54
KRH66032	Soybean	cytosol	38.52	33.4
TraesCS7D01G057300.1	Wheat	mitochondrion	38.77	33.4
TraesCS7A01G002700.1	Wheat	plastid	39.01	33.26
TraesCS3D01G128500.1	Wheat	mitochondrion	38.52	33.26
KRH75833	Soybean	cytosol	38.77	33.12
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	38.27	33.05
KRG97771	Soybean	plastid	38.27	32.77
KRH31113	Soybean	plastid	39.75	32.66
EER87684	Sorghum	plastid	39.51	32.45
TraesCS3A01G127300.1	Wheat	plastid	37.53	32.41
HORVU3Hr1G023780.1	Barley	plastid	38.27	31.89
TraesCS4A01G401500.1	Wheat	plastid	37.53	31.8
KRH08886	Soybean	cytosol, nucleus	29.88	26.95
KRH38407	Soybean	cytosol	29.63	26.79

Protein Annotations

EMBL:ACUP02002161	EnsemblPlants:KRH61317	EnsemblPlantsGene:GLYMA_04G040000	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF6	PFAM:PF02458	ProteinID:KRH61317	ProteinID:KRH61317.1	SEG:seg	UniParc:UPI00023C0D26
UniProt:I1JTK8	MapMan:50.2.3	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:3213937..3216162

Molecular Weight (calculated)

45280.5 Da

IEP (calculated)

6.045

GRAVY (calculated)

-0.203

Length

405 amino acids

Sequence
(BLAST)

001: MENLLEKLKH SLSLTLFHFY PLAGQLVTQK TQDPPSYTIF VDCNNTSGAR FIYATLDITI SDILSPIDVP PIVHSFFDHH KAVNHDGHTM PLLSIQVTEL
101: LDGVFIGCSM NHTIGDGTSY WNFFNTWSEI FFQTQAQGLE YDATVPISRH PIHNRWFPDG CGPLINLPFK HEDEFIDRFE SPKLRVRIFH FSAESIAKLK
201: ARANSESKSK TSEISSFQSL SAHVWRSVTR ARKLPNDEIT SCKLAISNRS RLEPPLPHEY FGNAVDVVST AGFTAGELLE KDLGWAAWKV HVAVANQNDK
301: AVRQKLKEWL KLPVVYQLGV HFDPCTVTMS SSPRFNMYGN EFGMGKAVAV LSGYANKNDG NVTAYQGYEG EGSIDLEICL SPDAVSALES DEEFMEAASV
401: ANFLH

Best Arabidopsis Sequence Match ( AT2G39980.1 )
(BLAST)

001: MPSLEKSVTI ISRNRVFPDQ KSTLVDLKLS VSDLPMLSCH YIQKGCLFTC PNLPLPALIS HLKHSLSITL THFPPLAGRL STSSSGHVFL TCNDAGADFV
101: FAQAKSIHVS DVIAGIDVPD VVKEFFTYDR AVSYEGHNRP ILAVQVTELN DGVFIGCSVN HAVTDGTSLW NFINTFAEVS RGAKNVTRQP DFTRESVLIS
201: PAVLKVPQGG PKVTFDENAP LRERIFSFSR ESIQELKAVV NKKKWLTVDN GEIDGVELLG KQSNDKLNGK ENGILTEMLE SLFGRNDAVS KPVAVEISSF
301: QSLCALLWRA ITRARKLPSS KTTTFRMAVN CRHRLSPKLN PEYFGNAIQS VPTFATAAEV LSRDLKWCAD QLNQSVAAHQ DGRIRSVVAD WEANPRCFPL
401: GNADGASVTM GSSPRFPMYD NDFGWGRPVA VRSGRSNKFD GKISAFPGRE GNGTVDLEVV LSPETMAGIE SDGEFMRYVT NK

Arabidopsis Description

At2g39980/T28M21.14 [Source:UniProtKB/TrEMBL;Acc:O04201]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.