Factsheet for AT5G42830.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02424	Canola	cytosol	84.67	84.86
Bra035334.1-P	Field mustard	cytosol	84.67	84.86
CDY21238	Canola	cytosol	84.44	84.63
CDX71519	Canola	cytosol, nucleus, plastid	82.89	83.07
AT5G07850.1	Thale cress	cytosol	65.11	64.25
AT5G07860.1	Thale cress	cytosol	64.22	63.66
AT5G07870.1	Thale cress	cytosol	64.89	62.93
VIT_18s0001g10180.t01	Wine grape	cytosol	60.44	59.91
KRH52020	Soybean	cytosol	59.78	58.99
KRH61316	Soybean	cytosol	58.89	57.48
KRH40990	Soybean	extracellular	38.0	56.07
VIT_18s0001g10230.t01	Wine grape	cytosol	41.33	55.86
Solyc04g078660.1.1	Tomato	cytosol	55.33	55.58
KRH52019	Soybean	cytosol	56.22	55.36
KRH61317	Soybean	vacuole	49.56	55.06
VIT_18s0001g10200.t01	Wine grape	cytosol	38.44	54.57
KRH61619	Soybean	cytosol	55.56	54.35
KRH61321	Soybean	cytosol	55.56	54.35
KRH61319	Soybean	cytosol, mitochondrion, nucleus	56.44	54.16
KRH40991	Soybean	cytosol	49.11	53.77
KRH61322	Soybean	cytosol	37.11	53.7
KRH61320	Soybean	cytosol, plastid	57.56	53.29
PGSC0003DMT400020526	Potato	cytosol	52.89	52.31
PGSC0003DMT400084781	Potato	cytosol	51.56	51.56
TraesCS7B01G414500.1	Wheat	cytosol	9.33	45.65
Os11t0244100-00	Rice	mitochondrion	44.67	42.05
GSMUA_Achr5P06650_001	Banana	cytosol	42.67	41.92
EER87685	Sorghum	mitochondrion	42.89	41.87
GSMUA_Achr7P13950_001	Banana	plastid	42.44	41.79
Os06t0103200-01	Rice	mitochondrion	42.67	41.65
TraesCS4A01G426400.1	Wheat	cytosol	31.56	40.11
TraesCS7D01G531500.1	Wheat	mitochondrion	42.22	40.0
OQU91799	Sorghum	mitochondrion	41.33	39.49
TraesCS7D01G003400.1	Wheat	plastid	41.11	39.36
Os07t0142700-00	Rice	plastid	41.33	39.16
Zm00001d035865_P001	Maize	mitochondrion	41.33	39.16
TraesCS4A01G495900.1	Wheat	plastid	41.11	39.03
HORVU7Hr1G000970.1	Barley	plastid	42.89	38.91
TraesCS7A01G002700.1	Wheat	plastid	40.67	38.53
TraesCS7D01G057300.1	Wheat	mitochondrion	40.0	38.3
TraesCS3D01G128500.1	Wheat	mitochondrion	39.56	37.95
AT2G39980.1	Thale cress	cytosol, plastid	40.22	37.55
TraesCS3B01G146500.1	Wheat	cytosol, mitochondrion, plastid	39.11	37.53
TraesCS3A01G127300.1	Wheat	plastid	39.11	37.53
TraesCS4A01G401500.1	Wheat	plastid	39.78	37.45
EER87684	Sorghum	plastid	40.89	37.32
AT5G01210.1	Thale cress	cytosol	38.67	36.63
AT5G67150.1	Thale cress	cytosol	35.78	35.94
HORVU3Hr1G023780.1	Barley	plastid	38.67	35.8
AT3G50290.1	Thale cress	cytosol	20.22	33.33
AT3G50300.1	Thale cress	cytosol	32.67	32.81
AT3G50280.1	Thale cress	cytosol	31.78	32.28
AT3G50270.1	Thale cress	plastid	32.22	32.22
AT5G67160.1	Thale cress	cytosol	30.89	32.03
AT5G38130.1	Thale cress	cytosol, plasma membrane	31.33	30.52
AT5G23940.1	Thale cress	mitochondrion	32.44	30.17

Protein Annotations

Gene3D:3.30.559.10	MapMan:50.2.3	EntrezGene:834294	ProteinID:AED94871.1	ArrayExpress:AT5G42830	EnsemblPlantsGene:AT5G42830
RefSeq:AT5G42830	TAIR:AT5G42830	RefSeq:AT5G42830-TAIR-G	EnsemblPlants:AT5G42830.1	TAIR:AT5G42830.1	ProteinID:BAB09184.1
InterPro:CAT-like_dom_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0016740	GO:GO:0016747	InterPro:IPR023213	RefSeq:NP_199097.1
PFAM:PF02458	PO:PO:0000013	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078
PO:PO:0001081	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PANTHER:PTHR31896	PANTHER:PTHR31896:SF6	UniProt:Q9FMN6	InterPro:Transferase	UniParc:UPI0000048BF7
SEG:seg	:	:	:	:	:

Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9FMN6]

Coordinates

chr5:+:17176293..17178130

Molecular Weight (calculated)

50526.6 Da

IEP (calculated)

6.827

GRAVY (calculated)

-0.173

Length

450 amino acids

Sequence
(BLAST)

001: MDSSSSVKIV SKSFVKPKTL PEESKQPYYL SPWDYAMLSV QYIQKGLLFH KPPLDSIDTL LEKLKDSLAV TLVHFYPLAG RLSSLTTEKP KSYSVFVDCN
101: DSPGAGFIYA TSDLCIKDIV GAKYVPSIVQ SFFDHHKAVN HDGHTMSLLS VQVTELVDGI FIGLSMNHAM GDGTAFWKFF TAWSEIFQGQ ESNQNDDLCL
201: KNPPVLKRYI PEGYGPLFSL PYSHPDEFIR TYESPILKER MFCFSSETIR MLKTRVNQIC GTTSISSFQS LTAVIWRCIT RARRLPLDRE TSCRVAADNR
301: GRMYPPLHKD YFGNCLSALR TAAKAGELLE NDLGFAALKV HQAVAEHTSE KVSQMIDQWL KSPYIYHIDR LFEPMSVMMG SSPRFNKYGC EFGLGKGVTL
401: RSGYAHKFDG KVSAYPGREG GGSIDLEVCL VPEFMEALES DEEFMSLVSL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.