Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030000.1-P | Field mustard | cytosol | 28.89 | 70.72 |
| CDX83119 | Canola | cytosol | 28.89 | 70.72 |
| AT3G50300.1 | Thale cress | cytosol | 66.14 | 65.4 |
| AT3G50290.1 | Thale cress | cytosol | 40.18 | 65.2 |
| AT3G50270.1 | Thale cress | plastid | 64.56 | 63.56 |
| AT5G38130.1 | Thale cress | cytosol, plasma membrane | 61.17 | 58.66 |
| AT5G67150.1 | Thale cress | cytosol | 58.24 | 57.59 |
| AT5G67160.1 | Thale cress | cytosol | 49.66 | 50.69 |
| AT5G07850.1 | Thale cress | cytosol | 33.86 | 32.89 |
| AT5G07860.1 | Thale cress | cytosol | 32.96 | 32.16 |
| AT5G42830.1 | Thale cress | cytosol | 32.28 | 31.78 |
| AT5G07870.1 | Thale cress | cytosol | 32.28 | 30.82 |
| AT5G01210.1 | Thale cress | cytosol | 32.28 | 30.11 |
| AT2G39980.1 | Thale cress | cytosol, plastid | 32.73 | 30.08 |
| AT5G23940.1 | Thale cress | mitochondrion | 27.99 | 25.62 |
Protein Annotations
| Gene3D:3.30.559.10 | MapMan:50.2.3 | EntrezGene:824190 | ProteinID:AEE78648.1 | ProteinID:ANM63633.1 | ArrayExpress:AT3G50280 |
| EnsemblPlantsGene:AT3G50280 | RefSeq:AT3G50280 | TAIR:AT3G50280 | RefSeq:AT3G50280-TAIR-G | EnsemblPlants:AT3G50280.1 | TAIR:AT3G50280.1 |
| ProteinID:CAB62307.1 | InterPro:CAT-like_dom_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0016747 | InterPro:IPR023213 | RefSeq:NP_001325708.1 | RefSeq:NP_190597.1 | PFAM:PF02458 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31896 | PANTHER:PTHR31896:SF12 | UniProt:Q9SND9 | InterPro:Transferase |
| UniParc:UPI0000048824 | SEG:seg | : | : | : | : |
Description
Uncharacterized acetyltransferase At3g50280 [Source:UniProtKB/Swiss-Prot;Acc:Q9SND9]
Coordinates
chr3:+:18637735..18639475
Molecular Weight (calculated)
49962.7 Da
IEP (calculated)
6.703
GRAVY (calculated)
-0.179
Length
443 amino acids
Sequence
(BLAST)
(BLAST)
001: MADVTFISSS IVRPQIINQE GREKIHLTPF DLNLLYVDYT QRGLLFPKPD PETHFISRLR TSLSSALDIY FPFAGRLNKV ENHEDETVSF YINCDGSGAK
101: FIHAVSDSVS VSDLLRPDGS VPDFFRIFYP MNGVKSIDGL SEPLLALQVT EMRDGVFIGF GYNHMVADGA SIWNFFRTWS KICSNGQREN LQPLALKGLF
201: VDGMDFPIHI PVSDTETSPP SRELSPTFKE RVFHFTKRNI SDLKAKVNGE IGLRDHKVSS LQAVSAHMWR SIIRHSGLNQ EEKTRCFVAV DLRQRLNPPL
301: DKECFGHVIY NSVVTTTVGE LHDQGLGWAF LQINNMLRSL TNEDYRIYAE NWVRNMKIQK SGLGSKMTRD SVIVSSSPRF EVYDNDFGWG KPIAVRAGPS
401: NSISGKLVFF RGIEEGCIDV HAFLLPDVLV KLLADVEFLE KCG
101: FIHAVSDSVS VSDLLRPDGS VPDFFRIFYP MNGVKSIDGL SEPLLALQVT EMRDGVFIGF GYNHMVADGA SIWNFFRTWS KICSNGQREN LQPLALKGLF
201: VDGMDFPIHI PVSDTETSPP SRELSPTFKE RVFHFTKRNI SDLKAKVNGE IGLRDHKVSS LQAVSAHMWR SIIRHSGLNQ EEKTRCFVAV DLRQRLNPPL
301: DKECFGHVIY NSVVTTTVGE LHDQGLGWAF LQINNMLRSL TNEDYRIYAE NWVRNMKIQK SGLGSKMTRD SVIVSSSPRF EVYDNDFGWG KPIAVRAGPS
401: NSISGKLVFF RGIEEGCIDV HAFLLPDVLV KLLADVEFLE KCG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.