Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015058.1-P | Field mustard | cytosol, plastid | 76.56 | 46.24 |
| CDY39539 | Canola | cytosol, plastid | 76.56 | 46.24 |
| CDX77413 | Canola | cytosol, plastid | 53.48 | 45.62 |
| AT3G50280.1 | Thale cress | cytosol | 65.2 | 40.18 |
| AT3G50300.1 | Thale cress | cytosol | 62.27 | 37.95 |
| AT3G50270.1 | Thale cress | plastid | 61.54 | 37.33 |
| AT5G38130.1 | Thale cress | cytosol, plasma membrane | 60.81 | 35.93 |
| AT5G67150.1 | Thale cress | cytosol | 54.95 | 33.48 |
| AT5G67160.1 | Thale cress | cytosol | 53.11 | 33.41 |
| AT5G07860.1 | Thale cress | cytosol | 34.07 | 20.48 |
| AT5G07850.1 | Thale cress | cytosol | 34.07 | 20.39 |
| AT5G42830.1 | Thale cress | cytosol | 33.33 | 20.22 |
| AT5G07870.1 | Thale cress | cytosol | 32.6 | 19.18 |
| AT5G01210.1 | Thale cress | cytosol | 31.14 | 17.89 |
| AT2G39980.1 | Thale cress | cytosol, plastid | 31.14 | 17.63 |
| AT5G23940.1 | Thale cress | mitochondrion | 29.3 | 16.53 |
Protein Annotations
| Gene3D:3.30.559.10 | EntrezGene:3769692 | MapMan:50.2.3 | ProteinID:AEE78649.1 | ArrayExpress:AT3G50290 | EnsemblPlantsGene:AT3G50290 |
| RefSeq:AT3G50290 | TAIR:AT3G50290 | RefSeq:AT3G50290-TAIR-G | EnsemblPlants:AT3G50290.1 | TAIR:AT3G50290.1 | InterPro:CAT-like_dom_sf |
| UniProt:F4J0K7 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0016747 | InterPro:IPR023213 |
| RefSeq:NP_190598.3 | PFAM:PF02458 | PANTHER:PTHR31896 | PANTHER:PTHR31896:SF12 | InterPro:Transferase | UniParc:UPI0001A7B1FB |
Description
HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:F4J0K7]
Coordinates
chr3:+:18639672..18641256
Molecular Weight (calculated)
30744.4 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.320
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHFFPSIDV KSIYGLSEPL LALQVTELKD GVFISFGYNH MVADGASIWN FFNTWSKICS NEYDHQKNLK PLVLRGWFLD KIDYRIHIPA SEADAPTSDE
101: ISQMPTSKER VFHFTKKNIS ELKTKANGET GSSDLIISSL QALSAHLWRS IIRHSGMKRE EETHCKVAVD LRQRLNPPLD KECFGNVNNL GVATVTVGEL
201: LDHEIGWAAL QISKMVRSQT DEKYKTFAEN WVNNVKISKT GDGSRMVCDS VVVSSSPWFD VYGNDFGWGT DCS
101: ISQMPTSKER VFHFTKKNIS ELKTKANGET GSSDLIISSL QALSAHLWRS IIRHSGMKRE EETHCKVAVD LRQRLNPPLD KECFGNVNNL GVATVTVGEL
201: LDHEIGWAAL QISKMVRSQT DEKYKTFAEN WVNNVKISKT GDGSRMVCDS VVVSSSPWFD VYGNDFGWGT DCS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.