Factsheet for Bra030000.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83119	Canola	cytosol	100.0	100.0
AT3G50280.1	Thale cress	cytosol	70.72	28.89
Bra015058.1-P	Field mustard	cytosol, plastid	64.64	25.89
Bra036069.1-P	Field mustard	plastid	60.77	24.44
Bra037763.1-P	Field mustard	cytosol	55.8	23.65
Bra012137.1-P	Field mustard	cytosol	54.14	22.02
Bra028199.1-P	Field mustard	cytosol	53.04	21.43
Bra003184.1-P	Field mustard	cytosol	51.38	20.9
Bra002962.1-P	Field mustard	cytosol	52.49	20.21
Bra012138.1-P	Field mustard	cytosol	45.3	18.76
Bra037126.1-P	Field mustard	cytosol	45.3	18.14
Bra029999.1-P	Field mustard	cytosol	28.18	15.74
Bra033050.1-P	Field mustard	extracellular, golgi	28.18	14.13
Bra035334.1-P	Field mustard	cytosol	33.7	13.59
Bra017041.1-P	Field mustard	cytosol	32.04	12.34
Bra028893.1-P	Field mustard	cytosol, plastid	32.04	12.11
Bra004996.1-P	Field mustard	cytosol	31.49	11.9
Bra029388.1-P	Field mustard	cytosol	30.94	11.76
Bra028682.1-P	Field mustard	cytosol	24.86	11.54
Bra009632.1-P	Field mustard	plastid	25.97	11.35
Bra028681.1-P	Field mustard	cytosol	28.18	11.23
Bra009716.1-P	Field mustard	cytosol	28.18	11.04
Bra028166.1-P	Field mustard	cytosol	16.02	10.55
Bra005957.1-P	Field mustard	plastid	1.1	1.05

Protein Annotations

EnsemblPlants:Bra030000.1	EnsemblPlants:Bra030000.1-P	EnsemblPlantsGene:Bra030000	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PFAM:PF02458	UniParc:UPI0002544517	UniProt:M4EMI0	MapMan:50.2.3	:	:

Description

AT3G50280 (E=1e-053) | transferase family protein

Coordinates

chrA01:+:15610798..15611453

Molecular Weight (calculated)

20605.6 Da

IEP (calculated)

6.001

GRAVY (calculated)

-0.128

Length

181 amino acids

Sequence
(BLAST)

001: MADVTVVSSI IVQPENSNRS GGEKIHLTPF DLNLLQIDYT QRVDHQEDKT LSFHIDCNGS GARFIHATAD SVSVSDLLQP DGSVPEIFKL FFPMNRVKNI
101: NGVSEALLAL EVTEIKDGVF ISFAYNHMVA DGVSIWNFFR TWSRICKNGQ RENLDRPIVL RQWFLDGIDF PIRIPPFLRQ R

Best Arabidopsis Sequence Match ( AT3G50270.1 )
(BLAST)

001: MAGGGVVLVS SSIVRPVNSS QSGRTKIHLT PFDLSLLQFD YPQRGLLFSK PDSDFHLIIS RLKDSLSLAL EIYFPFAGRL VKTENLEDDT VSFFIDCDGS
101: GARFLHTEAK SVSVSDILQP DGSVPDFLKY FFPADDFKSC DGVSLPLLVI QVTEMKDGVF ISFCYNHMVA DGVSMWSFFD TWSKICSTGS CFNYKPLVLK
201: GWFLEGIDYP IHVPVSEAER SPPSREPSSV PITKEWIFHF TKKNISDLKA KANSEIASSS DLEVSSLQAV SAHMWRSIIR HSGVSREQKT HCRLVVDLRQ
301: RVNPPLEKDC FGNMVYLSSA ITTVEELLDR GLGEAALQIR KLVSSQTNET CKSFAEDWVR NIKNLNSGIG SKVGNTIVIA SSPRFEVYNK DFGWGKPIAI
401: RAGPSNSING KLSVFQGISE GSIDVQAILW GDVIVKLLAD LEFLEHVTIA

Arabidopsis Description

Anthranilate N-hydroxycinnamoyl/benzoyltransferase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9SNE0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.