Factsheet for Bra005957.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14025	Canola	extracellular	48.95	61.18
Bra028682.1-P	Field mustard	cytosol	72.11	35.13
Bra028681.1-P	Field mustard	cytosol	72.11	30.18
Bra035334.1-P	Field mustard	cytosol	64.21	27.17
Bra029999.1-P	Field mustard	cytosol	36.32	21.3
Bra009632.1-P	Field mustard	plastid	43.68	20.05
Bra028166.1-P	Field mustard	cytosol	28.42	19.64
Bra028893.1-P	Field mustard	cytosol, plastid	44.21	17.54
Bra033050.1-P	Field mustard	extracellular, golgi	33.16	17.45
Bra017041.1-P	Field mustard	cytosol	43.16	17.45
Bra004996.1-P	Field mustard	cytosol	43.68	17.33
Bra028199.1-P	Field mustard	cytosol	36.84	15.62
Bra015058.1-P	Field mustard	cytosol, plastid	36.32	15.27
Bra012137.1-P	Field mustard	cytosol	35.26	15.06
Bra003184.1-P	Field mustard	cytosol	34.74	14.83
Bra036069.1-P	Field mustard	plastid	34.74	14.67
Bra009716.1-P	Field mustard	cytosol	35.26	14.5
Bra029388.1-P	Field mustard	cytosol	36.32	14.5
Bra012138.1-P	Field mustard	cytosol	33.16	14.42
Bra002962.1-P	Field mustard	cytosol	34.74	14.04
Bra037763.1-P	Field mustard	cytosol	30.53	13.58
Bra037126.1-P	Field mustard	cytosol	29.47	12.39
CDX68582	Canola	mitochondrion	1.05	1.36
Bra030000.1-P	Field mustard	cytosol	1.05	1.1

Protein Annotations

EnsemblPlants:Bra005957.1	EnsemblPlants:Bra005957.1-P	EnsemblPlantsGene:Bra005957	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF6	PFAM:PF02458	UniParc:UPI000253F6D5	UniProt:M4CP19	MapMan:35.1	:

Description

AT5G07870 (E=2e-079) | transferase family protein

Coordinates

chrA03:+:1410183..1410755

Molecular Weight (calculated)

20731.3 Da

IEP (calculated)

5.609

GRAVY (calculated)

-0.393

Length

190 amino acids

Sequence
(BLAST)

001: MISSLQSLTA FIWRSITRAR SLSNDQETTC RFAVGTRTRT DPPLPTNHFG VYTSLASTTA KTGDLLENGL GWAASKLHQA VTEQNGEKIA SELDHWLKAP
101: FVLQPDQLSE PNLVHMGSSP RFDKYGSEFG MGKAVAVRSG YNSKHDGKVS AYPGREGGGS IDLEVCLLPE FMEALESDQE FMSLVSSSQN

Best Arabidopsis Sequence Match ( AT5G07870.1 )
(BLAST)

001: MDSSSSEVRI ISKCFVKPKT IPQKWKEPYH FSPTDHIMLS IHYIQKGLLF LKPSFSESVK PKEFMETLLQ KLKDSLAIAL VHFYPLAGRL STLKTDNSRS
101: HSVFVDCNNS PGARFIHAES DLSVSDILGS TYVPLVVQSL FDHHKALNRD GYTMSLLSIK VTELVDGVFI GLSMNHSLGD GSSFWQFFNS LSEIFNSQEE
201: TIGNNNNNNN NALLCLKNPP IIREATGPMY SLPFSEPNES LSQSEPPVLK ERMFHFSSET VRSLKSKANQ ECGTTMISSF QALTALIWRS ITRARKLPND
301: QETTCRFAAG NRSRMNPPLP TNQFGVYISL VKTTTKIGNL LENEFGWIAL KLHQAVTEHT GEKISYEIDQ MLKSPLPLQA YRLSNLNIVH MGSSPRFNKY
401: GSEFGMGKAV AVRSGYGGKY DGKVSAYPGR QGGASIDLEV CLLPEFMEAL ESDQEFMSLV SSST

Arabidopsis Description

HXXXD-type acyl-transferase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD97]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.