Factsheet for Bra028893.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55902	Canola	endoplasmic reticulum, nucleus, peroxisome	96.24	90.75
CDY48117	Canola	endoplasmic reticulum, nucleus, peroxisome	94.36	89.5
AT5G01210.1	Thale cress	cytosol	88.1	88.84
Bra009632.1-P	Field mustard	plastid	76.62	88.65
KRH66032	Soybean	cytosol	67.64	69.38
KRH75833	Soybean	cytosol	67.64	68.35
VIT_08s0007g01930.t01	Wine grape	plastid	68.06	65.99
PGSC0003DMT400052409	Potato	cytosol, plastid	62.42	65.0
Solyc09g014280.1.1	Tomato	cytosol, plastid	61.59	64.13
Bra017041.1-P	Field mustard	cytosol	62.0	63.19
Bra004996.1-P	Field mustard	cytosol	63.05	63.05
GSMUA_Achr10P...	Banana	plastid	47.18	53.94
GSMUA_Achr8P19570_001	Banana	plastid	46.97	53.32
Zm00001d042826_P001	Maize	plastid	53.86	53.31
Os01t0854000-01	Rice	plastid	53.24	52.8
GSMUA_AchrUn_...	Banana	plastid	45.09	52.05
EES01771	Sorghum	plastid	53.65	51.92
Os05t0449200-01	Rice	plastid	51.77	51.67
TraesCS3B01G399600.1	Wheat	plastid	52.61	51.22
TraesCS3A01G367900.1	Wheat	plastid	52.61	51.12
TraesCS3D01G360900.1	Wheat	plastid	52.61	51.12
Zm00001d010079_P001	Maize	plastid	52.61	50.6
Zm00001d012333_P001	Maize	plastid	52.82	49.61
EES19625	Sorghum	plastid	53.24	49.51
TraesCS1A01G278800.1	Wheat	cytosol, plastid	52.82	47.92
TraesCS1B01G287800.1	Wheat	cytosol, plastid	52.4	47.63
HORVU3Hr1G085100.2	Barley	plastid	52.19	46.82
HORVU1Hr1G073330.1	Barley	cytosol	52.19	44.88
Bra005957.1-P	Field mustard	plastid	17.54	44.21
TraesCS1D01G278100.1	Wheat	plastid	52.61	44.13
Bra028682.1-P	Field mustard	cytosol	31.94	39.23
Bra035334.1-P	Field mustard	cytosol	35.91	38.31
Bra028681.1-P	Field mustard	cytosol	35.7	37.67
Bra012137.1-P	Field mustard	cytosol	31.11	33.48
Bra003184.1-P	Field mustard	cytosol	30.9	33.26
Bra037763.1-P	Field mustard	cytosol	29.65	33.26
Bra030000.1-P	Field mustard	cytosol	12.11	32.04
Bra009716.1-P	Field mustard	cytosol	30.9	32.03
Bra029388.1-P	Field mustard	cytosol	31.73	31.93
Bra015058.1-P	Field mustard	cytosol, plastid	30.06	31.86
Bra036069.1-P	Field mustard	plastid	29.65	31.56
Bra002962.1-P	Field mustard	cytosol	30.69	31.28
Bra028199.1-P	Field mustard	cytosol	29.02	31.03
Bra033050.1-P	Field mustard	extracellular, golgi	23.38	31.02
Bra029999.1-P	Field mustard	cytosol	20.88	30.86
Bra012138.1-P	Field mustard	cytosol	26.51	29.06
Bra037126.1-P	Field mustard	cytosol	27.35	28.98
Bra028166.1-P	Field mustard	cytosol	15.87	27.64

Protein Annotations

EnsemblPlants:Bra028893.1	EnsemblPlants:Bra028893.1-P	EnsemblPlantsGene:Bra028893	Gene3D:3.30.559.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016740	GO:GO:0016747	InterPro:CAT-like_dom_sf	InterPro:IPR023213	InterPro:Transferase	PANTHER:PTHR31896
PANTHER:PTHR31896:SF5	PFAM:PF02458	SEG:seg	UniParc:UPI000254362E	UniProt:M4EJC7	MapMan:35.1

Description

AT5G01210 (E=5e-231) | transferase family protein

Coordinates

chrA02:-:1542050..1543489

Molecular Weight (calculated)

52326.0 Da

IEP (calculated)

7.546

GRAVY (calculated)

-0.236

Length

479 amino acids

Sequence
(BLAST)

001: MPSCSVTEIS KCIVYPEKRS TVADLRLSVS DLPMLSCHYI QKGVLLSRPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STSPSGHIYI TCNDSGVEFV
101: AASAKHITVS DVLSPGKDVP LLVREFFVFE RLVSYNGHHK PLSAVQVTEL DDGVFIGCTV NHSVTDGTSF WHFFNTFADA TSGACKIKHL PDFSRNTVFD
201: SPAVLPVPPG GPRVTFDADQ PLRERVFHFS REAILKLKQR TNSKVNGIET VVNTEEILGK VSNDGMITNG NGNGNGKITK KKSYDRTAEI SSFQSLSAQL
301: WRSVTRARNL DPSKTTTFRM AVNCRPRLEP KMDPYYFGNA IQSIPTMASA GDVLTKDLRW SAGQLHRNVV AHDDATVRSG IADWESNPRL FPLGNADGAS
401: ITMGSSPRFP MYDNDFGWGK PLAVRSGGAN KFDGKISAFP GREGNGSVDL EVVLAPETMA GIENDPEFMQ YVSEVSYGC

Best Arabidopsis Sequence Match ( AT5G01210.1 )
(BLAST)

001: MPSCSVTEIS KCIVYPEKKS TVSDLRLSVS DLPMLSCHYI QKGVLLTSPP PSFSFDDLVS SLRRSLSSTL SLFPALAGRF STTPAGHISI VCNDAGVDFV
101: AASAKHVKLS DVLLPGEDVP LLFREFFVFE RLVSYNGHHK PLAAVQVTEL HDGVFIGCTV NHSVTDGTSF WHFFNTFADV TSGACKIKHL PDFSRHTVFD
201: SPVVLPVPPG GPRVTFDADQ PLRERIFHFS REAITKLKQR TNNRVNGIET AVNDGRKCNG EINGKITTVL DSFLNNKKSY DRTAEISSFQ SLSAQLWRSV
301: TRARNLDPSK TTTFRMAVNC RHRLEPKMDP YYFGNAIQSI PTLASAGDLL SKDLRWSAEQ LHRNVVAHDD ATVRRGIAAW ESDPRLFPLG NPDGASITMG
401: SSPRFPMYDN DFGWGKPLAV RSGGANKFDG KISAFPGREG NGSVDLEVVL APETMTGIEN DAEFMQYVSE VTYDC

Arabidopsis Description

AT5g01210/F7J8_190 [Source:UniProtKB/TrEMBL;Acc:Q9LFB5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.